Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco4g03087 ATGGTGAGGTTTTTAGGTTTGACTCTTGGTTACACAGAAGAACCCCGGGAAATAGCATCAAGATCGAACCTGACCAGTGAGTCTGGTGAAAATGGGTGGCTCATCAGGTTCTTTGACTCGTCATTCTTCTGCGAGTGGATTGCTGTTAGCTACTTGTATAAGCATGATCACGCGGGGGTGCGTGATTATCTCTGCAATAGAATGTATACTCTTCCGTTGCAAGGTGTTGAGAGTTATTTGTTCCAGATATGTTACATGATGATACACAAGCCTAGTCCGTCCTTGGATAAATATGTGATAGATGTGTGCTCGAAGTCGCTTAAAATTGCTTTGAAGGTACATTGGTTCTTGTTGGCGGAGCTTGAGGACTCTGATGATAATGAAGGGATTAGTAGGATTCAGGAGAAGTGTCAGATTGCTGCCACCTTGATGGGTGAATGGCCACCTCTAATTAGGCCTCAAACTGAACCTCCAAGTCCAGGAGGAAAGAGCCAAGTTTTGAATAGGTTGCTGTCATCTAAAAATCGCTTGTTGTCGCTAACATCTTCACCACCTGGTCAGAAGTCTATGTCATTTTCACCTTCCTCAGGAAACAATTTGCATGAGGATGGGAAACCAGTGTCTCCTGACGAGAACAAGATATTTAAGAAGTTTATACCTGGCCCTAAGGTTAGAGATGCTTTACTTTTTCGGAAATCAGTGGACAGAGATGATGATGGTTCTGAAAAGGATGGTTTTTTCAAGAGGCTTTTGAGAGATAGCAAAGGTGATGATGAACTGGGCCAAAAAATTCGTGATGCACTTCTGTTTAGGAAGTCATCTGTGAAAGATGATGAAGATTCTGAAAAAGATAATTTCTTTAGAAGGTTCTTAAGGGACAGTAGAGGTGACGATGAAGACTCAGAAAAGGATGGTTTCTTCCGAAGGTTCTTAAGGGACAGTAGAAGCGAGGATGAAGATGTAGCTTCAAGTTCAGAGGGATTATTTAAGAGGTTGTTTCGCGATAGCAAGAATGATCCCGAGGACAGAGCACAAACTAAAACAATAGAATATGAAGATAAAGAGGGATTTTTCCGAAAGTTGTTTCGGGAGAAATCAGAAGATAGGAAGGATGGAAGTGAAAGGAATGATAACAGAGAAGCTACTAATTTGGACGATAAATATGCCAAACCTGCTGAAGAGGATGAAAAAGAAGGGTTTTTCCGGAAATTATTAAAGGATAAATTTGAGGACAAGAAGGATACAAATGATAAAATTGAAGAGGGTACTACCAATGGTGAGGAAGAAGAGTCTTCTGAGTTTTCCTTGTTCAAAAGATTATTTCGTGTGCACCCAGAAGATACTAAAAGTAGTCTGGCCAATGCAAACATCAATAATGGTGGTTTAGTTGAAAGTAGTCCAGGTACTGATAATTTTTTTCGTAAGTTGTTCAGAGATCGTGACCGTTCAATTGAAGATTCAGAGCTATTCGGTTCAAAAAGACAGAAAGAGAAGCATCCTGGATCCCCAACGCAGCAAAGTGAAAAATTGAGCACAAAGCCTCCATTACCAACTAATCCATCTCAGTTTCGGAAAGGGGCATACCATGACTCATTGGAGTTTGTGCAGTCATTATGTGATACATCATACGGGTTAGTGGATGTATTTCCAATTGAAGATCGCAAAAGTGCTCTTCGTGAGGCACTTGTAGAAATCAATCTACATGTAGCAAAGGTTCAGAACACTGGAGGAGTTTGTTTTCCATTGGGAAAGGGTATGTATCGTGTGCTTAATATACCTGAAGATGAAGCTGTTCTCTTGAATTCTAGGGAGAAGGCACCTTTCCTGATCTGTGTAGAGGTTTTGAGATGTGAAATGCCAAGTAATTCCAAGGAGGCATCCAGTTCTCAGAAACTTTCTCAAGGGGGAATTCCTTTGGCAAATGGAGATGCTCTCTTGCAAAGACCACCCCCTTGGGCTTATCCATTACGGACAGCACAAGAGGTTTACCGCAATAGCAATGATAGGATGTCCAGTTCAACTGCTCACGCAATTGACCAGGCAATGACTCATGTATCTGAAGCAAAAATCAAATTTGTTAGTGTGAATCTTTCCGCCGAGACACAGTTAAATGGTCAGCCTGAGAAAATTGAAGTGGTTGATCTACATGGTGGCACTCAACGTTCTGCTTCAATTCATAGAGATGGTGGGTATGATGAAGCTGCAGCAGGACATGGCAGTGATTTGGAATGGGTACATGTAGTGTTGACAGCTGATCCTGGGGTTAGATTGGAAGATATTGAGGAGCAAGCACCACCTCGGAGGAAGGAACATCGTCGTGTTCCAAGTACGGTGGCAATAGAGGAAGTAAAGGCTGCGGCAGCAAAAGGGGAAGCACCTCTTGGACTTCCTTTGAAAGGTGCTGGTCAAGATTCATCTGATGCGCAACCAAGGGCTAATGGAATTACTCCCAAAGCCAGCGATGCCTTGTCTGGTGAACTTTGGGAGGCAAAGAAGGATAGAATATGCAAGGCTTCAATATATGGGAAGTTACCTGGTTGGGACTTGCGATCTGTTATTGTTAAGAGTGGTGATGATTGCAGGCAGGAGCATCTGGCTGTTCAACTTATTTCTCACTTCTATGATATTTTCCAAGAAGCTGGTCTACCCCTCTGGCTGCGACCGTATGAAGTTCTGTGTACTTCTTCTTACACAGCTGTTATTGAAACAATTCCAGATACGGCTTCTCTACACTCTATCAAAAGTAGATATCCGAACATCTCAAGCTTACGTGAATTCTTCAGTGCTAAGTATCAAGAAAATTCTCCCGGTTTTAAACTTGCACAGAGAAACTTTGTTGAAAGTATGGCAGGATATTCCCTGGTGTGCTACTTTCTGCAGGTGAAGGATAGGCATAATGGGAACCTCCTATTGGATGAAGAAGGTCATATCATACATATTGATTTTGGCTTCATGCTCTCCAATTCACCTGGTGGTGTTAACTTTGAAAGTGCACCTTTCAAATTAACTCGGGAGCTTCTTGAGGTTATGGATTCTGATGCTGAGGGTGTTCCAAGTGAGTTCTTTGATTACTTTAAGGTTTTATGCATTCAAGGCTTCCTTACTTGTCGCAAGCATGCTGAGCGCATCATTCTTCTTGTTGAGATGTTGGAGGATTCAGGTTTCCCATGTTTTAAAGGTGGTGCTCGGACAATACAGAACCTACGAAAGCGATTCCATCTCAATTTAACTGAAGAGCAATGTGTCTCCTTGGTGCTTTCACTCATCAGCAGTAGCCTGGATGCTTGGAGGACACGGCAGTATGATTATTATCAGAGGGTTTTGAATGGAATATTATGA 3339 0.422 MVRFLGLTLGYTEEPREIASRSNLTSESGENGWLIRFFDSSFFCEWIAVSYLYKHDHAGVRDYLCNRMYTLPLQGVESYLFQICYMMIHKPSPSLDKYVIDVCSKSLKIALKVHWFLLAELEDSDDNEGISRIQEKCQIAATLMGEWPPLIRPQTEPPSPGGKSQVLNRLLSSKNRLLSLTSSPPGQKSMSFSPSSGNNLHEDGKPVSPDENKIFKKFIPGPKVRDALLFRKSVDRDDDGSEKDGFFKRLLRDSKGDDELGQKIRDALLFRKSSVKDDEDSEKDNFFRRFLRDSRGDDEDSEKDGFFRRFLRDSRSEDEDVASSSEGLFKRLFRDSKNDPEDRAQTKTIEYEDKEGFFRKLFREKSEDRKDGSERNDNREATNLDDKYAKPAEEDEKEGFFRKLLKDKFEDKKDTNDKIEEGTTNGEEEESSEFSLFKRLFRVHPEDTKSSLANANINNGGLVESSPGTDNFFRKLFRDRDRSIEDSELFGSKRQKEKHPGSPTQQSEKLSTKPPLPTNPSQFRKGAYHDSLEFVQSLCDTSYGLVDVFPIEDRKSALREALVEINLHVAKVQNTGGVCFPLGKGMYRVLNIPEDEAVLLNSREKAPFLICVEVLRCEMPSNSKEASSSQKLSQGGIPLANGDALLQRPPPWAYPLRTAQEVYRNSNDRMSSSTAHAIDQAMTHVSEAKIKFVSVNLSAETQLNGQPEKIEVVDLHGGTQRSASIHRDGGYDEAAAGHGSDLEWVHVVLTADPGVRLEDIEEQAPPRRKEHRRVPSTVAIEEVKAAAAKGEAPLGLPLKGAGQDSSDAQPRANGITPKASDALSGELWEAKKDRICKASIYGKLPGWDLRSVIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLCTSSYTAVIETIPDTASLHSIKSRYPNISSLREFFSAKYQENSPGFKLAQRNFVESMAGYSLVCYFLQVKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEVMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLEDSGFPCFKGGARTIQNLRKRFHLNLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco4g03087 1112 MobiDBLite consensus disorder prediction 794 818 - -
Phco4g03087 1112 Gene3D - 745 904 - -
Phco4g03087 1112 FunFam Phosphatidylinositol 4-kinase beta 1 909 1110 - -
Phco4g03087 1112 SMART pi3k_hr1_6 851 1110 IPR000403 -
Phco4g03087 1112 MobiDBLite consensus disorder prediction 487 523 - -
Phco4g03087 1112 ProSitePatterns Phosphatidylinositol 3- and 4-kinases signature 1. 854 868 IPR018936 GO:0016301
Phco4g03087 1112 MobiDBLite consensus disorder prediction 178 202 - -
Phco4g03087 1112 MobiDBLite consensus disorder prediction 412 431 - -
Phco4g03087 1112 PANTHER PHOSPHATIDYLINOSITOL KINASE 44 660 IPR015433 GO:0046854|GO:0048015
Phco4g03087 1112 MobiDBLite consensus disorder prediction 487 503 - -
Phco4g03087 1112 CDD PI4Kc_III_beta 820 1112 - -
Phco4g03087 1112 MobiDBLite consensus disorder prediction 178 213 - -
Phco4g03087 1112 MobiDBLite consensus disorder prediction 504 519 - -
Phco4g03087 1112 MobiDBLite consensus disorder prediction 363 395 - -
Phco4g03087 1112 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 829 1097 IPR000403 -
Phco4g03087 1112 Gene3D - 909 1110 IPR036940 -
Phco4g03087 1112 FunFam phosphatidylinositol 4-kinase beta 1 745 904 - -
Phco4g03087 1112 Pfam Phosphatidylinositol 3- and 4-kinase 851 1057 IPR000403 -
Phco4g03087 1112 SUPERFAMILY Protein kinase-like (PK-like) 557 1105 IPR011009 -
Phco4g03087 1112 ProSiteProfiles PIK helical domain profile. 1 140 IPR001263 -
Phco4g03087 1112 SUPERFAMILY ARM repeat 54 126 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco4g03087 Phco-Chr4 51834975 51851314 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco4g03087 4 51834975 51851314 Phco4g03087 4 51834975 51851314 ECH
Phco4g03087 4 51834975 51851314 Phco7g01711 7 17156721 17171701 PCT