Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01708 ATGGCTTCAAGTACTGCTGGAAAGGTCATAAAGTGCAAAGCTGCGGTGGCATGGGAAGCTGGAAAACCACTGGTGATAGAGGAAGTTGAGGTAGCTCCACCACAGGCTAATGAAGTTCGTCTGAAGATCTTGTTCACCTCACTCTGCCACACTGATGTCTACTTCTGGGAAGCCAAGGGACAGACACCTCTATTTCCACGGATATTTGGTCATGAAGCAGGAGGAATCGTGGAAAGTGTTGGTGAGGGTGTGATAGATCTCAACCCTGGTGATCATGTGCTTCCAGTCTTCACAGGGGAGTGCAAGGAGTGTGATCACTGCAAATCAGAGGAAAGTAACATGTGTGACCTCCTAAGGATTAACACTGACCGTGGAGTGATGCTGAATGATGGCAAGTCAAGGTTTTCAATCAAAGGACAACCAATATACCACTTTGTTGGAACCTCCACTTTCAGTGAATACACTGTAGTCCATGTTGGCTGTGTTGCCAAGATCAACCCCACTGCCCCACTTGATAAAGTTTGTGTTCTGAGCTGTGGAATCTCAACAGGTCTTGGTGCTACACTGAATGTTGCAAAACCAAGAAAAGGTTCATCAGTAGCTATATTTGGATTGGGAGCAGTGGGGCTTGCTGCTGCCGAGGGAGCTAGACTTGCAGGAGCTTCCAGGATAATTGGGGTTGACTTGAATTCCAAGAGATTTACTGAAGCTAAGAAGTTTGGAGTTACTGATTTTGTGAATCCAAAAGATTATGACAAGCCAGTTCAAGAGGTGATTGCTGAAATAACTGACGGGGGAGTGGACCGAAGTGTTGAGTGTACTGGCAGTGTCAGTGCTATGATCTCAGCATTTGAGTGTGTGCACGATGGATGGGGTATAGCTGTACTTGTTGGTGTGCCAAATAAAGATGCTGCTTTCAGAACTCATCCAATTAATATCCTAAACGAAAAGACTCTCAAGGGTACTTTCTTTGGCAACTATAAACCTCGTTCTGATCTCCCATCAGTGGTGGAGATGTACATGAAGAAGGAACTTGAACTGGAGAAATTTATCACCCATGAAGTACCTTTTTCGGAAATCAACAAAGCCTTTGAATATATGCTTAAAGGGGAGGGCCTGCGTTGCATAATCCGCATGACTGCATAG 1146 0.452 MASSTAGKVIKCKAAVAWEAGKPLVIEEVEVAPPQANEVRLKILFTSLCHTDVYFWEAKGQTPLFPRIFGHEAGGIVESVGEGVIDLNPGDHVLPVFTGECKECDHCKSEESNMCDLLRINTDRGVMLNDGKSRFSIKGQPIYHFVGTSTFSEYTVVHVGCVAKINPTAPLDKVCVLSCGISTGLGATLNVAKPRKGSSVAIFGLGAVGLAAAEGARLAGASRIIGVDLNSKRFTEAKKFGVTDFVNPKDYDKPVQEVIAEITDGGVDRSVECTGSVSAMISAFECVHDGWGIAVLVGVPNKDAAFRTHPINILNEKTLKGTFFGNYKPRSDLPSVVEMYMKKELELEKFITHEVPFSEINKAFEYMLKGEGLRCIIRMTA 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01708 381 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 170 343 IPR036291 -
Phco7g01708 381 FunFam alcohol dehydrogenase 1-like isoform X1 20 183 - -
Phco7g01708 381 CDD alcohol_DH_plants 10 378 - -
Phco7g01708 381 SUPERFAMILY GroES-like 329 378 IPR011032 -
Phco7g01708 381 Gene3D - 20 371 - -
Phco7g01708 381 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 70 84 IPR002328 GO:0008270|GO:0016491
Phco7g01708 381 Pfam Alcohol dehydrogenase GroES-like domain 37 162 IPR013154 -
Phco7g01708 381 Pfam Zinc-binding dehydrogenase 207 337 IPR013149 -
Phco7g01708 381 FunFam Alcohol dehydrogenase class-P 184 322 - -
Phco7g01708 381 Gene3D - 184 322 - -
Phco7g01708 381 PANTHER ALCOHOL DEHYDROGENASE 7 377 - -
Phco7g01708 381 SUPERFAMILY GroES-like 5 187 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01708 Phco-Chr7 17098848 17101921 Dispersed/Transposed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01708 7 17098848 17101921 Phco7g01708 7 17098848 17101921 ECH
Phco2g00739 2 7842778 7845949 Phco7g01708 7 17098848 17101921 PCT