Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00739 ATGTCTGCAACCGTTGGGCAGATAATCAAGTGCAAAGCTGCGATTGCATGGGAGGCAGGGAAGCCACTGGTGATTGAAGAAGTAGAGGTGGCGCCACCCAAAGCTGGGGAAGTCCGTTTGAAGATCCTCTACACCTCCCTTTGCCACACCGATGTTTACTTTTGGGAAGCCAAGGGCCAGACTCCATTGTTTCCTCGTATTTTTGGCCATGAAGCTTCAGGTATTGTGGAGAGCATTGGGGAAGGTGTTACTCATTTGCAACCAGGAGACCATGCCCTGCCTGTGTTCACAGGAGAGTGTGGGGAATGTGCACATTGCAAGTCAGAAGAAAGCAACATGTGTGAGCTCCTCAGGATCAACACCGATAGGGGTGTCATGATCAATGATGGCCAATCAAGGTTCTCTAAGAATGGAAAACCCATATACCATTTCTTGGGAACCTCCACATTCAGTGAATACACAGTTGTCCACGCTGGATGTGTTGCAAAGATCAACCCAGCTGCTCCACTTGACAAATCTTGTGTTCTCAGTTGTGGAATTTGCACAGGATTTGGTGCTACTGTTAATGTTGCAAAACCAAAACCTGGTTCCTCTATTGCCATTTTCGGACTTGGAGCCGTTGGCCTTGCGGCTGCAGAAGGGGCAAGAATTTCAGGTGCTTCAAGAATCATTGGAATTGATTTAGTTTCATCCAGATTTGAAGAAGCTAAGAAGTTTGGGGTTAACGAGTTTGTGAATCCAAAGGATCATGATAAACCTATACAACAGGTAATTGCTGAAATGACCAATGGAGGAGTGGATCGGGCTGTCGAATGTACTGGCAGCATCCAGGCCATGATTTCGGCATTTGAATGTGTCCATGATGGTTGGGGTCTTGCTGTACTTGTTGGTGTGCCTAGTAAAGATGATGCATTCAAAACTGCTCCTATTAATTTCCTGAATGAGAGGACTCTTAAAGGCACCTTTTATGGTAACTACAAACCACGCACTGATCTTCCATCTGTTGTGGAAAAGTACATGAGCGGGGAGCTAGAAGTAGATAAATTCATCACTCACTCAGTTCCCTTCTCAGAGATCAACAAAGCCTTTGAATACATGCTGAAAGGACAGTCCATTAGGTGTATTATTCGCATGCAAGAGTAA 1143 0.4549 MSATVGQIIKCKAAIAWEAGKPLVIEEVEVAPPKAGEVRLKILYTSLCHTDVYFWEAKGQTPLFPRIFGHEASGIVESIGEGVTHLQPGDHALPVFTGECGECAHCKSEESNMCELLRINTDRGVMINDGQSRFSKNGKPIYHFLGTSTFSEYTVVHAGCVAKINPAAPLDKSCVLSCGICTGFGATVNVAKPKPGSSIAIFGLGAVGLAAAEGARISGASRIIGIDLVSSRFEEAKKFGVNEFVNPKDHDKPIQQVIAEMTNGGVDRAVECTGSIQAMISAFECVHDGWGLAVLVGVPSKDDAFKTAPINFLNERTLKGTFYGNYKPRTDLPSVVEKYMSGELEVDKFITHSVPFSEINKAFEYMLKGQSIRCIIRMQE 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00739 380 Gene3D - 183 321 - -
Phco2g00739 380 FunFam Alcohol dehydrogenase class-P 183 321 - -
Phco2g00739 380 SUPERFAMILY GroES-like 329 377 IPR011032 -
Phco2g00739 380 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 69 83 IPR002328 GO:0008270|GO:0016491
Phco2g00739 380 PANTHER ALCOHOL DEHYDROGENASE 6 376 - -
Phco2g00739 380 Pfam Alcohol dehydrogenase GroES-like domain 36 163 IPR013154 -
Phco2g00739 380 CDD alcohol_DH_plants 9 377 - -
Phco2g00739 380 Pfam Zinc-binding dehydrogenase 206 330 IPR013149 -
Phco2g00739 380 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 169 343 IPR036291 -
Phco2g00739 380 FunFam alcohol dehydrogenase 1-like isoform X1 19 182 - -
Phco2g00739 380 SMART PKS_ER_names_mod 20 376 IPR020843 GO:0016491
Phco2g00739 380 Gene3D - 19 370 - -
Phco2g00739 380 SUPERFAMILY GroES-like 4 186 IPR011032 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00739 Phco-Chr2 7842778 7845949 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00739 2 7842778 7845949 Phco2g00739 2 7842778 7845949 ECH
Phco2g00739 2 7842778 7845949 Phco7g01708 7 17098848 17101921 PCT