Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01545 ATGTGGAAACTAACCAGTTTGCTCATTCTATTTACATTCTTCACTTGCTCTTTCTCTTACTCATTCACCATCATCAACAACTGTCCACATACTATATGGCCTGGTACACTTGCAGGTTCAGGGAGTCCTCCACTTGCAACAACCGGATTCCGGTTGGACATGCGTGAAAGCATCAAACTTACAACTGTCCCAGGTTGGTCAGGACGGATATGGGCAAGGACTGGTTGTAAATTTGATACAACAGGAGTTGGCAGATGCCAAACGGGTGACTGTGGAGGAAGGCTGGAGTGTGAGGGAAATGGTGCTGCTCCTCCTACCTCACTGTTTGAGATAACACTTGGGGCAGGCAATGGACAAGACTACTATGATGTTAGCATGGTAGATGGTTACAATTTGCCATTACTCGCTTTACCACGGGGTGTATATGGTGGCGCCTGTAATGCCACAGGTTGTATTACTGATATCAACAGAGGTTGCCCAACAGAACTTCAAGTATTAGGAGGTGTCCAAAACCAACGGGTAGTTGGCTGTAGGAGTGCTTGTGAGGCATTCAAGTTGGACAAGTATTGCTGCAGTGGAGAATTTGCAAATCCAAATACATGTCATCCTTCCTATTATTCAACCTTGTTCAAGAAGGCTTGTCCAAGAGCTTATAGCTATGCGTATGACGATGGCACCAGCACTTTCACTTGCAAGGCATACGAATACGATATTGTTTTCTGTCCCAACAGCAACGGAACGGGAAGACCAACTCCTGCATCTCCTCCTCCACCAATTAGACAGCCTTATTGGAAGCATCAGCAGGTCCCTTCCTCATCAAATATTTTATTACCCTTTCCAGCGCCAATCTTTCTCTTCGTTCTCACTCTTACTTTCTTGGCATTTGTAAGACACGGCCAGTGA 903 0.4563 MWKLTSLLILFTFFTCSFSYSFTIINNCPHTIWPGTLAGSGSPPLATTGFRLDMRESIKLTTVPGWSGRIWARTGCKFDTTGVGRCQTGDCGGRLECEGNGAAPPTSLFEITLGAGNGQDYYDVSMVDGYNLPLLALPRGVYGGACNATGCITDINRGCPTELQVLGGVQNQRVVGCRSACEAFKLDKYCCSGEFANPNTCHPSYYSTLFKKACPRAYSYAYDDGTSTFTCKAYEYDIVFCPNSNGTGRPTPASPPPPIRQPYWKHQQVPSSSNILLPFPAPIFLFVLTLTFLAFVRHGQ 300
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01545 300 Gene3D Thaumatin 21 242 IPR037176 -
Phco7g01545 300 PANTHER OS03G0233200 PROTEIN 9 242 IPR001938 -
Phco7g01545 300 ProSitePatterns Thaumatin family signature. 82 97 IPR017949 -
Phco7g01545 300 FunFam THAUMATIN-LIKE PROTEIN 1 20 242 - -
Phco7g01545 300 Pfam Thaumatin family 26 242 IPR001938 -
Phco7g01545 300 PIRSF PR5 1 281 IPR001938 -
Phco7g01545 300 SMART tha2 22 242 IPR001938 -
Phco7g01545 300 SUPERFAMILY Osmotin, thaumatin-like protein 22 243 IPR037176 -
Phco7g01545 300 CDD TLP-PA 21 241 - -
Phco7g01545 300 PRINTS Pathogenesis-related protein signature 82 111 IPR001938 -
Phco7g01545 300 PRINTS Pathogenesis-related protein signature 69 80 IPR001938 -
Phco7g01545 300 PRINTS Pathogenesis-related protein signature 21 33 IPR001938 -
Phco7g01545 300 PRINTS Pathogenesis-related protein signature 120 136 IPR001938 -
Phco7g01545 300 PRINTS Pathogenesis-related protein signature 232 241 IPR001938 -
Phco7g01545 300 ProSiteProfiles Thaumatin family profile. 19 244 IPR001938 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01545 Phco-Chr7 14658119 14659241 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01545 7 14658119 14659241 Phco7g01545 7 14658119 14659241 ECH
Phco3g01140 3 9827690 9828893 Phco7g01545 7 14658119 14659241 PCT