Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01534 ATGATAAACGGGATTCGGGGCAGGGAGCAGCATTGGTGGGTTGGGTTTGGACGTAGAATGAGAACGGATAGGTGGGCTAATAGCATGGGAAGGATTTCAAGATTTGGGAGTTTGGCACTTGCTTCTTCCATTAAGGAAAACCAACAACAACCTTCTATTACCTGCACCACTTTTAACATTCTCGCTCCCATTTACAAGCGCATCAACGATGAGGATCCAAGTTGCCGCGAGAGCGACTACAGAACGTATTGGTTGGAGAGGAATCACAGGATATTGGACTGGTTGTTGAATGAGATGTCTTCAATTATCTGTCTTCAGGAATTTTGGGTTGGAAATGAAGAACTTGTTAATTTGTATGAGAAGAGACTTGGAGACGCTGGTTATGTCAGTTTCAAGCTTGGAAGAACAAACAACCGTGGGGATGGTCTTCTTATAGCAGTGCAAAAGGAAAACTTTAATATTCTTAATTACAAGGAGTTACACTTCAATGACTTTGGAGATCGTGTAGCTCAGTTGTTACATGTTGAACTAGCTTCTCCGTTTACACAATGGCGAAACAGTAATATTAGGCAGGAAATTTTGATTGTTAACACTCACCTGCTATTTCCCCACGATTCAACTCTATCCCTTGTACGACTGCAGCAGGTTTACAAGATTCTTCAATACGTAGAATCTTATCAGAATGATTTTCAACTCAAGCCAATGCCAATCATGCTCTGCGGTGACTGGAATGGAAGCAAACGTGGACATGTCTACAAGTTCCTGAGGTCTCAGGGCTTTGTATCTTCTTATGATACTGCACATCATTACACTGATGCAGATGCAGACAAGTGGGTTAGCCACCGCAATCATAGGGGAAATATATGTGCTGTTGATTTTATTTGGCTCCTAAATCCTGACAAATATCGAAAACTACTAAAAGCAAGTTGGAGTGAAGCAGTGTTTGGTATGTTCAAGTATCTGGTACGGAGAGCTTCATTGACTGAGAGTGATGCATTTGCCTTTCTAAAGGCTGATAATGAAGATTGTATTACCTATTCAGGTTTCTGTGAAGCACTTACACAGCTCAGTTTAACTGGGCATTGCCATGGATTAAATGACGAAGAAATAAAGGACTTGTGGCTCCAAGCAGCTGTAGATGGAAATGGTGTTCTTGATTATAAAGAATTCCTGCAGCAAATCTGGAATTCAACAGCTCCAGATCAGAGTGATGACAGCAAAAATGGGGAAAAGGATGACGGTGTAAATGATTCACAGGATCAAACAATTGGTTTCAGTGTAAAAAATGCAGTTCTGTTTCCTCCAGAGGTGGAGAAAGGTAGATGGCCTGAAGACTACTCCCTTTCTGATCATGCACGGCTCACTGTTGTGTTCTCGCCAATAAGAATGCCATGCTCCCAGTTGATTTGCTAA 1413 0.4176 MINGIRGREQHWWVGFGRRMRTDRWANSMGRISRFGSLALASSIKENQQQPSITCTTFNILAPIYKRINDEDPSCRESDYRTYWLERNHRILDWLLNEMSSIICLQEFWVGNEELVNLYEKRLGDAGYVSFKLGRTNNRGDGLLIAVQKENFNILNYKELHFNDFGDRVAQLLHVELASPFTQWRNSNIRQEILIVNTHLLFPHDSTLSLVRLQQVYKILQYVESYQNDFQLKPMPIMLCGDWNGSKRGHVYKFLRSQGFVSSYDTAHHYTDADADKWVSHRNHRGNICAVDFIWLLNPDKYRKLLKASWSEAVFGMFKYLVRRASLTESDAFAFLKADNEDCITYSGFCEALTQLSLTGHCHGLNDEEIKDLWLQAAVDGNGVLDYKEFLQQIWNSTAPDQSDDSKNGEKDDGVNDSQDQTIGFSVKNAVLFPPEVEKGRWPEDYSLSDHARLTVVFSPIRMPCSQLIC 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01534 470 SUPERFAMILY EF-hand 281 397 IPR011992 -
Phco7g01534 470 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 37 458 - -
Phco7g01534 470 MobiDBLite consensus disorder prediction 398 420 - -
Phco7g01534 470 FunFam Putative calcium-binding protein 37 462 - -
Phco7g01534 470 Pfam Endonuclease/Exonuclease/phosphatase family 57 263 IPR005135 GO:0003824
Phco7g01534 470 Gene3D Endonuclease/exonuclease/phosphatase 37 463 IPR036691 -
Phco7g01534 470 SUPERFAMILY DNase I-like 43 266 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01534 Phco-Chr7 14581752 14585750 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01534 7 14581752 14585750 Phco7g01534 7 14581752 14585750 ECH
Phco3g01131 3 9729924 9733315 Phco7g01534 7 14581752 14585750 PCT