Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01131 ATGGGAAGAATTTCAAGGACCATAAGTTGCGCAATTGCCTCTTCAATGCAAGATAACCAACACCAACCACCTTGCATTACCTGCACCACTTTTAACATTCTTGCACCAATATACAAGCGTCTCAACCATGAGGATCGGAATTGCCGTGAAAGTGACTACAAAGCGTGTTGGTTGGCCAGGAATCAGAGGATATTGGATTGGTTGTTGTATGAGAGATCTTCCATTATCTGTCTTCAGGAATTTTGGATTGGAAACGAAGAGCTTGTTGATGTATATGACAAGAGACTTGGTGATGCTGGTTATATTAATTTCAAGCTTGCACGAACTAACAATCGTGGTGATGGTCTTCTGATAGCAGTGCAAAAGGATTATTTCACAGTTGTTAACTATAAGGAGCTGCACTTTAATGATTGTAGTGATCGAGTAGCTCAACTGTTACACGTTGAGTTGGCTTTTCCCTTATCACAATGTCAAAACAGTGATGTTAGGCACGAAATTCTCATTGTCAACACTCACCTACTGTTTCCTCATGATTCGAGTCTCTGCCTTGTACGACTGCATCAAGTCTACAAGATACTTCAATATCTCGAATCTTATCAGAATGAGCACCAACTTAAGCCTTTGCCAATCCTATTATGCGGTGACTGGAATGGAAGCAAAAGGGGACATGTTTACAAGTTCCTGAGGTCTCAGGGGTTTGTATCATCATATGATGCTGCACATCATTACACTGATGCTGATGCTCACAAGTGGGTTAGCCACCACAATCATCTCGGAAACACATGTGCTGTTGATTTTATATGGCTTCTTAACCCTGACAAATATCAAAAACTACTTAAAACAAGTTGGAGTGAAGCACTGTTTAGCATGTTTAAGTATCTATTGCAAAGAGATTCACTGACAAAGAGAGATGCATTTGCTTTTCTAAAGATTGACAATGAAGATTGTATTACCTATTCTGGTTTCTGTGCAGCACTTAGACAGCTTAATTTAATTGGTCATTGTCATGGCTTAAGTGTTGAAGAGACAAAGGACTTGTGGGTTCAAGCAGATATAAATGGAAATGGTGTTATTGATTATAAAGGATTTCTGCAGCAAATCTGGAATCCAACAGGATCAGATGAAAGAGATGACAAGAATGAGCAACATGATGATGAGGCAAACGATAGTGAGGAGGAGCAAACAATTGGTTTTGATGTAAAAAATGCAGTTCTTTTCCCTCCAGAGGTAGAAAAAGGTAGATGGCCTGAAGACTACTCTCTCTCTGATCATGCAACACTCACTGTAGTGCTCTCACCTATAAGAATGCTATGCCACACTCCAAAATAA 1329 0.3973 MGRISRTISCAIASSMQDNQHQPPCITCTTFNILAPIYKRLNHEDRNCRESDYKACWLARNQRILDWLLYERSSIICLQEFWIGNEELVDVYDKRLGDAGYINFKLARTNNRGDGLLIAVQKDYFTVVNYKELHFNDCSDRVAQLLHVELAFPLSQCQNSDVRHEILIVNTHLLFPHDSSLCLVRLHQVYKILQYLESYQNEHQLKPLPILLCGDWNGSKRGHVYKFLRSQGFVSSYDAAHHYTDADAHKWVSHHNHLGNTCAVDFIWLLNPDKYQKLLKTSWSEALFSMFKYLLQRDSLTKRDAFAFLKIDNEDCITYSGFCAALRQLNLIGHCHGLSVEETKDLWVQADINGNGVIDYKGFLQQIWNPTGSDERDDKNEQHDDEANDSEEEQTIGFDVKNAVLFPPEVEKGRWPEDYSLSDHATLTVVLSPIRMLCHTPK 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01131 442 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 19 431 - -
Phco3g01131 442 Pfam Endonuclease/Exonuclease/phosphatase family 30 240 IPR005135 GO:0003824
Phco3g01131 442 SUPERFAMILY EF-hand 282 366 IPR011992 -
Phco3g01131 442 FunFam Putative calcium-binding protein 9 435 - -
Phco3g01131 442 SUPERFAMILY DNase I-like 19 241 IPR036691 -
Phco3g01131 442 Gene3D Endonuclease/exonuclease/phosphatase 6 435 IPR036691 -
Phco3g01131 442 MobiDBLite consensus disorder prediction 371 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01131 Phco-Chr3 9729924 9733315 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01131 3 9729924 9733315 Phco7g01534 7 14581752 14585750 PCT