Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01527 ATGGGTGAGGAAGTAAAACAAGAATTAGCTGCAGAGGAAAATTCAGCAGAAGAGAAACAAGAAAAAGGCCCGGTAGAGGAGAAGAAAGAGCCTAAACCAACATCTCCGTGTGTGTTGTTTGTTGACTTACATTGTATAGGATGCGCCAAGAAAATTAAAAAATCTATTATGAAGATGAGAGGAGTTGAGGGAGTGGTGATTGATATGGCTAAAAATCAAGTGACCGTAAGGGGAAGAGTGGAGCCTGATGCAATATGTAACATGATTACGAAGAAAACAAAGAAAAGAGCCCAAGTTATACCTCCAAAGCCAGAACCTGAAGAAGAATCTATACCAGAAGTTGTCACTTCTCAGGCTGGTGAAGCAGTTACTGTGGAACTTAAGATAAGCATGCATTGTGAGGCCTGCGCTGAGCAGCTCAAACGGAAGATACTCAAATTGAGAGGAGTTCAAACAGCAGTGGCAGAGCTTAGCACAGGGAAGGTTATTGTGACGGGGACCATGGATGCAAACAAGCTAGTGGACTATGTTCATAGACGCACCAAAAAACAGGTCAAAATAGTTCCTCAGCCAGAACCTGAACCAGGACCAAAGAAAGAATTAGAGAAGCCTGCAGCAGAAGAGGTGAAAGCTGAGGAAGAGAAAGAAGAAAAGGAGGAGAAGAAAGAAGAGGAGAAACCAGCAGAGAAACCTGAGGAAGAAGAAGGTGGCAATGATGGTAATAATGAGAGTAAAGAAGAGAAAGGCGTTGAAGAAGAAGAAGCGAAGAAAGAAGTGGTTGGGGATGAGAATGGAGTGGTGGATAACGTTGATGATGAAAGCATGAAGAGGATGATGTACTCTTACTATTACCAACCACCACTCTATGTTATTGAACGAACCCCAGCCCCTCAGTTATTCAGTGATGAAAATCCCAATGCATGTTGCATTTCATAA 936 0.4263 MGEEVKQELAAEENSAEEKQEKGPVEEKKEPKPTSPCVLFVDLHCIGCAKKIKKSIMKMRGVEGVVIDMAKNQVTVRGRVEPDAICNMITKKTKKRAQVIPPKPEPEEESIPEVVTSQAGEAVTVELKISMHCEACAEQLKRKILKLRGVQTAVAELSTGKVIVTGTMDANKLVDYVHRRTKKQVKIVPQPEPEPGPKKELEKPAAEEVKAEEEKEEKEEKKEEEKPAEKPEEEEGGNDGNNESKEEKGVEEEEAKKEVVGDENGVVDNVDDESMKRMMYSYYYQPPLYVIERTPAPQLFSDENPNACCIS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01527 311 ProSiteProfiles Heavy-metal-associated domain profile. 34 97 IPR006121 GO:0046872
Phco7g01527 311 ProSiteProfiles Heavy-metal-associated domain profile. 122 185 IPR006121 GO:0046872
Phco7g01527 311 Coils Coil 203 226 - -
Phco7g01527 311 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 311 IPR044258 GO:0046872
Phco7g01527 311 SUPERFAMILY HMA, heavy metal-associated domain 119 180 IPR036163 GO:0046872
Phco7g01527 311 MobiDBLite consensus disorder prediction 1 34 - -
Phco7g01527 311 SUPERFAMILY HMA, heavy metal-associated domain 38 92 IPR036163 GO:0046872
Phco7g01527 311 Gene3D - 34 99 - -
Phco7g01527 311 Gene3D - 119 187 - -
Phco7g01527 311 Pfam Heavy-metal-associated domain 39 91 IPR006121 GO:0046872
Phco7g01527 311 Pfam Heavy-metal-associated domain 129 178 IPR006121 GO:0046872
Phco7g01527 311 MobiDBLite consensus disorder prediction 1 33 - -
Phco7g01527 311 MobiDBLite consensus disorder prediction 184 270 - -
Phco7g01527 311 CDD HMA 126 166 IPR006121 GO:0046872
Phco7g01527 311 Coils Coil 2 22 - -
Phco7g01527 311 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01527 Phco-Chr7 14490662 14492885 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01527 7 14490662 14492885 Phco7g01527 7 14490662 14492885 ECH
Phco3g01123 3 9687277 9689336 Phco7g01527 7 14490662 14492885 PCT