Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01123 ATGGGTGAGGAAGCAAAACAGGAACAACCTGTGGCTGAAGCCAGGCCAGAGGAGAAGCCAGCAGAGGAAAAGAAGGAAGAAAAACCAGAAGAAAAGCCAGCAGAAGAGAAGAAGGAAGAGCCTAAACCACCTTCCCCATGTGTGCTGTTTGTGGACTTGCATTGTGTCGGATGTGCCAAGAAAATTGAGAGATATATTATGAAAATGAGAGGTGTTGAGGGAGTGGTAATTGACATGGCTAAAAATGAAGTGACCATAAAGGGTATAGTGGAGCCTCAAGCGATCTGCAACATAATCACCAGGAAAACAAAGAGAAGAGCCAGTGTTATATCTCCATTGCCTGAAGCAGAAGGAGAACCTATACCAGAAGTTGTCAATTCTCAGGTTAGTGGACCAGTTACTTTGGAACTAAACGTGAACATGCACTGTGAGGCCTGTGCTGATCAACTCAAGAAGAAGATACTACAAATGAGAGGAGTTCAAACAGCAGTGACAGAGTTTACAACAGGGAAGGTTCTTGTGACTGGGACAATGGATGCAAATAAGCTAGTAGATTATGTGTATAGACGCACCAAAAAGCAAGCCAAGATAGTTCCCCAGCCAGAACCGGAACCAGAACCAGAAAAGAAAGAAGAGAGTAAAGAAGGAGAGAAACCTGCTGCAGAAGAGACTAAACCTGAAGAGAAGAAAGAGGAAGAGAAGCCAGCAGAGGAAGCAAAGAAAGAAGAGGGTGGTGAGGATAAGGAGGAAAAGGTTGGTGAAGAAGGCATGGAAGAAGCCAAAAAAGAAGAGAATGTGGTAGTGGCTGCTAATAATAACATTGATGATGAAGGTTTGAAGAGGATGATGTACTATTATCAATACCCTCCACTCTATGTCATTGAACGAACACCAGCCCCACAACTCTTCAGTGATGAAAATCCTAATGCATGCTGCATTACATGA 945 0.4349 MGEEAKQEQPVAEARPEEKPAEEKKEEKPEEKPAEEKKEEPKPPSPCVLFVDLHCVGCAKKIERYIMKMRGVEGVVIDMAKNEVTIKGIVEPQAICNIITRKTKRRASVISPLPEAEGEPIPEVVNSQVSGPVTLELNVNMHCEACADQLKKKILQMRGVQTAVTEFTTGKVLVTGTMDANKLVDYVYRRTKKQAKIVPQPEPEPEPEKKEESKEGEKPAAEETKPEEKKEEEKPAEEAKKEEGGEDKEEKVGEEGMEEAKKEENVVVAANNNIDDEGLKRMMYYYQYPPLYVIERTPAPQLFSDENPNACCIT 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01123 314 Gene3D - 131 197 - -
Phco3g01123 314 Gene3D - 46 109 - -
Phco3g01123 314 ProSiteProfiles Heavy-metal-associated domain profile. 132 196 IPR006121 GO:0046872
Phco3g01123 314 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 9 1 314 IPR044258 GO:0046872
Phco3g01123 314 CDD HMA 136 176 IPR006121 GO:0046872
Phco3g01123 314 CDD HMA 53 108 IPR006121 GO:0046872
Phco3g01123 314 MobiDBLite consensus disorder prediction 1 43 - -
Phco3g01123 314 SUPERFAMILY HMA, heavy metal-associated domain 129 193 IPR036163 GO:0046872
Phco3g01123 314 MobiDBLite consensus disorder prediction 194 264 - -
Phco3g01123 314 Pfam Heavy-metal-associated domain 49 92 IPR006121 GO:0046872
Phco3g01123 314 Pfam Heavy-metal-associated domain 138 184 IPR006121 GO:0046872
Phco3g01123 314 MobiDBLite consensus disorder prediction 1 44 - -
Phco3g01123 314 SUPERFAMILY HMA, heavy metal-associated domain 48 101 IPR036163 GO:0046872
Phco3g01123 314 ProSiteProfiles Heavy-metal-associated domain profile. 44 107 IPR006121 GO:0046872
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01123 Phco-Chr3 9687277 9689336 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01123 3 9687277 9689336 Phco7g01527 7 14490662 14492885 PCT