Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01422 ATGGCTTGTGTGGCACTTCGTCCTCTGCGTGAAGAATCTTTCAACACCGGTGGTGAATTCACCGGCTGTTTCAGTCCTCTTTTGAGGGACTCAATTTTGATTTACGTAACTGTTGGTGGATCTGTGATTCCTATGCGTATTATGGAGACAGATTCAATTGCTTCAGTGAAGCTGAGAATTCAAACCTTTAAAGGATTTTTTGTAAAAAAACAGAAACTGGTTTTTGAAGGGAAGGAGTTGGCTCGTAATAGATCTTGTATCCGTGATTATGGGGTTGGTGATGGGAATGTTCTGCACCTGGTGCTGAGGCTTTCTGATCTCAAAGCTATTACAGTTAAGACTGTGTGTGGAAAGGAGTTTGGGCTTTATGTTGAGAAGAGTAGGAGTGTCGGTTATGTGAAGCAGCAGATTGCAAAACAAGGGCAAGGGTTAGTAGATCTTAAGGATCAAGAACTGACATGTGAGGGTGAGGAACTTGAAGACCAGAGACTTATTGAGGATATCTGTAAGGACAATGATGCTGTAATTCATTTTTTGGTCAGAATATCAGATGCCAAGGTAAGGACTAAACCAGTCGAGAAGGATTTTGAATTATCAATTGAGGCCTCATATACACACAATCTGGTGTCAAATTTACATGCAGACCAGTTAGCGTCAGTCTCTGTAACAAATGTGATCCTGGAGAGGAATCAATTATCAAAGGATTCTCTTGTGGAACCAATTATTATGAATTCCAACAAGAAAATTCCACCAGTGATTCACAAGATAATTAAGATCACTTCAGAGGGGTTAGAAAATGGCTGTAAACCAATTCAATCTCCAGAGGGATCAGGAGGAGCTTATCTAATGCAAGATTCATCTGGCTTGAAGTATATTTCTGTTTTCAAACCCATTGATGAAGAGCCAATGGCAATTAATAACCCTCGAGGCCTACCTATTTCCGAGGATGGTGAAGGGCTAAAGAAAGGTACACGGGTAGGGCAAGGTGCGTTGAGAGAAGTTGCAGCTTACATTTTGGATCATCCTAGGAAAGGACCACGCTCATATCATAACAATGAGGAACCAGGATTTGCTGGAGTTCCACCTACAGTCATGGTCAAATGCCTGCATAAAGGATTTCATAATGTTGAAGGTTATCAAAATGTTTCAGGTAATGCTAAAATAGGATCGCTTCAGATGTTTATGAGGAATATTGGAAGTTGTGAAGACGTGGGCCCCAGTGCTTTTCCAGTTGAAGAGGTACACAAGATCACTGTGCTGGATATCAGATTGGTAAATGCAGATAGGCATGCTGGCAACATTTTGATTGCCAAGGATGGTGACGACGGTGCTACAATCCTCATTCCAATTGATCATGGCTACTGCTTCCCTGAGAGCTTTGAAGACTGCACTTTTGATTGGTTATACTGGCCACAAGCTAAGGAACCTTACTCTGCAGACACCATTGATTACATAAAGTCTCTGGATGCTGAAGAAGATATAAAGCTTTTGAAGTTTCATGGATGGGATCTTCCTCCTAAGTGTGCCCAGATCCTTCGTATATCAACCATGCTTCTTCAGAAAGGGGCAGAGAGAGGACTCACTCCGTTTGCCATAGGAAGCATCATGTGTAGAGAAACACTGAAGAAAAAATCTGTGATTGAACAAATTGTGCAGGAAGCTGAGGAAGCTGCTTTTCCTGGAGCAAGTGAAGCTGCATTTCTTGATCAAGTTTCAGTGATCATGGATAGTCATTTGGATGAGGCATTCCCATTTAACTGA 1761 0.4174 MACVALRPLREESFNTGGEFTGCFSPLLRDSILIYVTVGGSVIPMRIMETDSIASVKLRIQTFKGFFVKKQKLVFEGKELARNRSCIRDYGVGDGNVLHLVLRLSDLKAITVKTVCGKEFGLYVEKSRSVGYVKQQIAKQGQGLVDLKDQELTCEGEELEDQRLIEDICKDNDAVIHFLVRISDAKVRTKPVEKDFELSIEASYTHNLVSNLHADQLASVSVTNVILERNQLSKDSLVEPIIMNSNKKIPPVIHKIIKITSEGLENGCKPIQSPEGSGGAYLMQDSSGLKYISVFKPIDEEPMAINNPRGLPISEDGEGLKKGTRVGQGALREVAAYILDHPRKGPRSYHNNEEPGFAGVPPTVMVKCLHKGFHNVEGYQNVSGNAKIGSLQMFMRNIGSCEDVGPSAFPVEEVHKITVLDIRLVNADRHAGNILIAKDGDDGATILIPIDHGYCFPESFEDCTFDWLYWPQAKEPYSADTIDYIKSLDAEEDIKLLKFHGWDLPPKCAQILRISTMLLQKGAERGLTPFAIGSIMCRETLKKKSVIEQIVQEAEEAAFPGASEAAFLDQVSVIMDSHLDEAFPFN 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01422 586 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 41 557 IPR044571 -
Phco7g01422 586 FunFam Phosphatidylinositol 4-kinase gamma 4 29 108 - -
Phco7g01422 586 Pfam Phosphatidylinositol 3- and 4-kinase 276 531 IPR000403 -
Phco7g01422 586 Gene3D - 29 106 - -
Phco7g01422 586 CDD Ubl_ubiquitin_like 110 177 - -
Phco7g01422 586 SMART ubq_7 108 181 IPR000626 GO:0005515
Phco7g01422 586 SMART ubq_7 32 103 IPR000626 GO:0005515
Phco7g01422 586 SUPERFAMILY Protein kinase-like (PK-like) 422 581 IPR011009 -
Phco7g01422 586 SUPERFAMILY Ubiquitin-like 34 105 IPR029071 -
Phco7g01422 586 Gene3D - 109 198 - -
Phco7g01422 586 SUPERFAMILY Ubiquitin-like 106 183 IPR029071 -
Phco7g01422 586 ProSiteProfiles Ubiquitin domain profile. 108 185 IPR000626 GO:0005515
Phco7g01422 586 ProSiteProfiles Ubiquitin domain profile. 30 103 IPR000626 GO:0005515
Phco7g01422 586 Pfam Ubiquitin family 110 181 IPR000626 GO:0005515
Phco7g01422 586 Pfam Ubiquitin family 34 104 IPR000626 GO:0005515
Phco7g01422 586 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 267 566 IPR000403 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01422 Phco-Chr7 13135964 13138640 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco1g00587 1 5105821 5108256 Phco7g01422 7 13135964 13138640 ECH
Phco7g01422 7 13135964 13138640 Phco7g01422 7 13135964 13138640 ECH