Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01323 ATGGCTAGCAACGCTGCTGCCTGTGCTGACAGAGCAACTAGTGACATGCTCATTGGCCCGGACTGGGCTATCAACATAGAGTTGTGTGATATCATTAATATGGACCCGGGGCAAGCAAAGGATGCATTGAAGATACTCAAAAAACGTTTGGGCAGTAAAAATCCAAAAATACAGCTTCTGGCACTTTTTGTCTTGGAGACCCTCAGTAAAAATTGTGGTGAAAGTGTATTTCAGCAGATAATCGAGCGGGATATCTTACATGAAATGGTTAAGATAGTGAAGAAGAAGCCAGATTTAAATGTGAGGGAGAAGATACTGATTTTAATTGATACATGGCAAGAAGCTTTTGGGGGGTCAACTGGGGTTTATCCCCAGTATCATGCAGCGTATAATGAATTGAAGTCTGCTGGAGTTGAGTTTCCACCACGAGATGAGAATAGTGTACCATTCTTCACTCCTCCTCAAACTCAGCCAATTGTTCATTCTGCTGAAGAATATGATGATGCTACTATTCAGGCTTCTCTCCAGTCAGATGCATCTGGCCTTAGTTTGATAGAGATTCAAAATGCTGAAGGACTAGCTGATGTGTTGATGGAAATGCTTAGTGCCTTGAATCCTAAAGACCATGAGGGTGTGAAGGAGGAAGTGATTGTTGACCTTGTTGACCAGTGCCGTTCATACCAAAAGCGGGTCATGCTTCTTGTGAACACTACTACGGATGAGCAGCTTTTAGGTAAGGGATTGGCACTGAATGACAGCCTTCAGCGGGTGCTCTGTAGACATGATGATATTGTGAAAGGAACTTCTGATTCAGTTGCTAGAGAAGCAGAAACTACAGTTCTGCCACTTGTTAATGTAAACCATGAAGATGATGAATCAGAAGAGGATTTTGCTCAACTAGCCCATAGGTCATCACGTGATTCTCATGCACAGAATAGGAAACCAGTCTATGACAAGGCAGAACCAGGGAGGATAAACCCAGTTATTCCCCCACCGCCAGCATCAAAGAAGCCTGTCTACTCTGGCACTGGTGTGGTTGATTATCTCAGCGGTGATACATACAAGACAGAAGGATCTCCTCAAAACTCAGAACGCACTTCATTTCCAGCTCCTGTCAACTCTAGCCCTAATCCAACCTCATCAGTGTCTTCATCTCGTCCCCATGCAGTGAGTACCTCAGCACCTATTTTTAGCAGCCAGCCTGTCTATGATGAACAGCCATCTTCTGAGCGGCTGCCTCAAGCTCCCTTGGACGCCCAATCTTCTGGCATCATTCCACCCCCACCTTCGAAGTATAATCAGAGACAACAGTTTTTTGAGCAACAAGGTGCATCTCATTCAAGTAGTGGATCCAGTTCCTCTTATGACAGCTTGGTGGGACAAACTCAAAATCTCTCGCTGAATTCATCCACCCCAACCAAAGAACAGAAGCCAGAAGATGCCCTTTTCAAAGATCTCGTTGATTTTGCGAAATCCAAAACCTCATCATCTTCCAAACCCAATAGGTCATATTGA 1515 0.4442 MASNAAACADRATSDMLIGPDWAINIELCDIINMDPGQAKDALKILKKRLGSKNPKIQLLALFVLETLSKNCGESVFQQIIERDILHEMVKIVKKKPDLNVREKILILIDTWQEAFGGSTGVYPQYHAAYNELKSAGVEFPPRDENSVPFFTPPQTQPIVHSAEEYDDATIQASLQSDASGLSLIEIQNAEGLADVLMEMLSALNPKDHEGVKEEVIVDLVDQCRSYQKRVMLLVNTTTDEQLLGKGLALNDSLQRVLCRHDDIVKGTSDSVAREAETTVLPLVNVNHEDDESEEDFAQLAHRSSRDSHAQNRKPVYDKAEPGRINPVIPPPPASKKPVYSGTGVVDYLSGDTYKTEGSPQNSERTSFPAPVNSSPNPTSSVSSSRPHAVSTSAPIFSSQPVYDEQPSSERLPQAPLDAQSSGIIPPPPSKYNQRQQFFEQQGASHSSSGSSSSYDSLVGQTQNLSLNSSTPTKEQKPEDALFKDLVDFAKSKTSSSSKPNRSY 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01323 504 MobiDBLite consensus disorder prediction 426 476 - -
Phco7g01323 504 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Phco7g01323 504 Pfam GAT domain 194 267 IPR004152 GO:0035091|GO:0043130
Phco7g01323 504 Gene3D - 176 274 IPR038425 -
Phco7g01323 504 ProSiteProfiles GAT domain profile. 178 266 IPR004152 GO:0035091|GO:0043130
Phco7g01323 504 PANTHER TOM1-LIKE PROTEIN 2 500 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phco7g01323 504 MobiDBLite consensus disorder prediction 295 320 - -
Phco7g01323 504 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Phco7g01323 504 Gene3D - 2 158 IPR008942 -
Phco7g01323 504 CDD VHS 10 135 - -
Phco7g01323 504 FunFam TOM1-like protein 2 4 151 - -
Phco7g01323 504 Pfam VHS domain 9 136 IPR002014 GO:0035091|GO:0043130
Phco7g01323 504 CDD GAT_GGA-like_plant 186 264 - -
Phco7g01323 504 PIRSF TOM1 1 503 IPR014645 -
Phco7g01323 504 SUPERFAMILY ENTH/VHS domain 3 142 IPR008942 -
Phco7g01323 504 MobiDBLite consensus disorder prediction 288 482 - -
Phco7g01323 504 MobiDBLite consensus disorder prediction 354 407 - -
Phco7g01323 504 SUPERFAMILY GAT-like domain 140 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01323 Phco-Chr7 11916170 11921859 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00757 2 8143718 8153146 Phco7g01323 7 11916170 11921859 PCT