Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00757 ATGGCTAACAATGCATCAGCCTGTGCTGAGAGGGCAACCAGTGACATGCTGATTGGACCAGACTGGGCAATTAACATAGAGTTGTGTGATATCATCAATATGGACCCTAGGCAAGCAAAGGATGCAATAAAGATACTTAAGAAGCAATTGAGCAGTAAAAATCCCAAAATTCAACTTCTGGCTCTTTTTGCACTGGAAACCCTTAGTAAAAATTGTGGTGACAGTGTATTTCAACAGATCATTGAGCGGGATATCTTACGTGACATGGTTAAAATAGTGAAGAAGAAGCCTGACTTAAGTGTGAGGGAAAAGATATTGACTTTGATTGATACATGGCAAGAAGCTTTTGGTGGACCAAATGGAAGGTATCCCCAATACCATGCAGCATATAATGAATTAAAGTCTGCTGGCGTTGAATTTCCCCCGCGAGAAGAGAATAGTGTTCCTTTCTTCACTCCTCCACAAACCCAGTCAGTTGCTCATAGTGCTGCAGAAGAATATTCTGCTGCTGCTATTCAGTCTGATGCATCTGGCCTTAGTTTGCCAGAGATTCAGAATGCTCAAGGACTAGCAGATGTATTGAGTGAAATTCTTAATGCCTTGGATCCTAAAAGTCCTGAGGTTGTGAAGCAGGAGGTGATTGTTGACCTTGTTGACCAGTGTCGTTCTTACCAAAAGCGTGTCATGCTTCTTGTGAATGAGACTGTGGATGAGCAACTTTTATGTCAGGGGTTGGCACTGAATGACAGTCTTCAACGAGTGCTTAATCAACATGAGAACATTGTAAAAGCAACTCCTGTTACAGGCACAAGAGGAGTAGAAACATCAATTCTGCCACCTGTAAATGTAAAGAATGAAGAGGAAGACGAGTCAGAGGATGATTTTGCCCAACTAGCCCATAGGTCATCACGAGATACTAATACACAGAGACGGAAACAAGTCAATGACAAGGTAGAAGCAGTGAGAATAAACCGAATTCTTCCCCCACCACCTGCACCAAAGAAACCAGTGTCCTCTGATGCTGGTATGATTGATTATCTCAGTGGTGATGTGTACAAAATAGAAGAATCCCACGAACTCTCTGAGCCAACATCTTATGTCGAACCCTTTCATTCCAGTTCCAATAATCCTGCCTCAACCACTAGAACATTGTCTTCATCCCCGCCTTGTTCCCCAAGTACCTCATCACCAAGTTTAAGCAAGCAGCCTGTGTCTGATGAAACATCTGTCATCAATAAATCCTCAGAAATCCTTACTCCAACTCCTCGGGAAACACAATCTCCTGGCTTCCTTCCACAACCCCCTTCAATGTTTTATCCGACACAACAGTTTTCTGAGCAACAAGGTGTATCTCATCCAACTTTTGGGTCTAGTTCCTCAAATGACAACTTGTTGGCACAAACCCAGAATCTATCTCTGAATTCGTCTACTCCAATCAAACAAGAGAAGCCAGAAGAGGTCCTTTTTAAGGATCTACTTGACTTTGCAAAATCCAAAACCTCATCACCTTCTAAACCCAGCAGTAGGCCATTTTGA 1536 0.4264 MANNASACAERATSDMLIGPDWAINIELCDIINMDPRQAKDAIKILKKQLSSKNPKIQLLALFALETLSKNCGDSVFQQIIERDILRDMVKIVKKKPDLSVREKILTLIDTWQEAFGGPNGRYPQYHAAYNELKSAGVEFPPREENSVPFFTPPQTQSVAHSAAEEYSAAAIQSDASGLSLPEIQNAQGLADVLSEILNALDPKSPEVVKQEVIVDLVDQCRSYQKRVMLLVNETVDEQLLCQGLALNDSLQRVLNQHENIVKATPVTGTRGVETSILPPVNVKNEEEDESEDDFAQLAHRSSRDTNTQRRKQVNDKVEAVRINRILPPPPAPKKPVSSDAGMIDYLSGDVYKIEESHELSEPTSYVEPFHSSSNNPASTTRTLSSSPPCSPSTSSPSLSKQPVSDETSVINKSSEILTPTPRETQSPGFLPQPPSMFYPTQQFSEQQGVSHPTFGSSSSNDNLLAQTQNLSLNSSTPIKQEKPEEVLFKDLLDFAKSKTSSPSKPSSRPF 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00757 511 MobiDBLite consensus disorder prediction 366 426 - -
Phco2g00757 511 ProSiteProfiles VHS domain profile. 12 141 IPR002014 GO:0035091|GO:0043130
Phco2g00757 511 CDD GAT_GGA-like_plant 183 261 - -
Phco2g00757 511 Pfam GAT domain 190 263 IPR004152 GO:0035091|GO:0043130
Phco2g00757 511 SUPERFAMILY GAT-like domain 145 263 - -
Phco2g00757 511 SMART VHS_2 5 137 IPR002014 GO:0035091|GO:0043130
Phco2g00757 511 MobiDBLite consensus disorder prediction 282 341 - -
Phco2g00757 511 MobiDBLite consensus disorder prediction 436 481 - -
Phco2g00757 511 CDD VHS 10 135 - -
Phco2g00757 511 ProSiteProfiles GAT domain profile. 175 263 IPR004152 GO:0035091|GO:0043130
Phco2g00757 511 MobiDBLite consensus disorder prediction 358 483 - -
Phco2g00757 511 SUPERFAMILY ENTH/VHS domain 7 142 IPR008942 -
Phco2g00757 511 MobiDBLite consensus disorder prediction 294 319 - -
Phco2g00757 511 Gene3D - 176 269 IPR038425 -
Phco2g00757 511 PANTHER TOM1-LIKE PROTEIN 2 504 IPR044836 GO:0035091|GO:0043130|GO:0043328
Phco2g00757 511 PIRSF TOM1 1 508 IPR014645 -
Phco2g00757 511 Gene3D - 2 158 IPR008942 -
Phco2g00757 511 Pfam VHS domain 8 136 IPR002014 GO:0035091|GO:0043130
Phco2g00757 511 FunFam TOM1-like protein 2 4 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00757 Phco-Chr2 8143718 8153146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00757 2 8143718 8153146 Phco2g00757 2 8143718 8153146 ECH
Phco2g00757 2 8143718 8153146 Phco7g01323 7 11916170 11921859 PCT