Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01278 ATGGCCACACAGAATCGTCGTTCCTCGTTTTCCTCCTCAACGACGTCGTCTTTGGCCAAGCGCCATGCATCCACCACCGCTTCCTCCTCTACCTCCTCCTCTTTAGCGGCTTCTACAAACGTGCCCAAGAAGCGTCCACCTCTCTCTAACCTCACCAACACCGTCGCTCACCGCAACTCTTCCTCTTCGGTTCCCTGCGCAGCTAAACTCGCGAAGACGAAGAAAGAGCCTGTTCCGCTCTGCTCAGGCAATAAAAGGCCTGCGTTGGCGAATGTCAAACCTACTAATGCAGTTGTTTTCCCCAAGGCTAATTCTCTCCCTGCGAGGAATCAAGCTCCTCCTCCTCCTCCTCCACTCGTTGTCACTGTTACTGTTCCTCCTCCGGTGCTGGATGTTTCACCTAGTACATCAGATGCAATGTCGGTTTCTATGGATGAGTCGATGTCTTCTTGTGACTCGTTCAAGAGTCCTGACATTGAATATGTGGACAATAGTGATGTTGCGGCTGTTGATTCAATTGAGAGGAAGACATTCAGCAATCTCAACATCTCTGATTCTGCCGAATCAGGCAACATTTGTAGTAGAGACATACTTGTTGAGTTGGAAAAAGGGGACAAGTTTATCAATGTTGATAACAATTACGCGGATCCTCAGCTTTGCGCATCCTTTGCTTGTGATATCTACAAGCACCTTCGTGCGTCTGAGGCAAAGAAAAGGCCTTCCACTGACTTCATGGAGAGAATTCAGAAGGACATAAACCCCAGCATGCGTGCAATATTGATTGATTGGCTTGTGGAGGTGGCTGAAGAGTATAGACTAGTACCTGATACATTGTATTTGACGGTAAACTACATTGACCGGTATCTTTCAGGAAATGTGATGAACAGACAAAGATTACAATTACTTGGTGTTGCCTCCATGATGATTGCCTCTAAATATGAGGAGATTTGTGCACCCCAGGTGGAGGAATTTTGTTACATTACTGATAACACGTACTTCAAAGACGAGGTTTTGCAGATGGAATCTGCTGTCTTAAATTTTCTCAAGTTCGAAATGACAGCCCCAACGGTAAAATGTTTCTTAAGAAGATTTGTACGTGCAGCCCAAGGAGTCGACGAGGTCCCTTCGCTGCAACTAGAGTGCTTGACAAACTATATTGCCGAATTGTCTCTCTTGGAGTACAGTATGCTTTGTTATGCTCCATCACTTATAGCCGCTTCTGCAATTTTTCTGGCCAGATTTATACTTTCCCCTTCAACGAAACCATGGAATTCCACATTGCAGCATTACACACTCTACCAGCCCTCTGATCTGTGTGTTTGCGTGAAGGATCTCCACCGCCTTTGTGGTAACAGCCCTAACTCTAATTTGCCTGCAATCAAGGAGAAATATAGTCAGCACAAGTATAAATATGTGGCCAAGAAGTACTGCCCTCCTTCAATACCCCAAGAATTTTTCCTGAGTTGA 1467 0.4567 MATQNRRSSFSSSTTSSLAKRHASTTASSSTSSSLAASTNVPKKRPPLSNLTNTVAHRNSSSSVPCAAKLAKTKKEPVPLCSGNKRPALANVKPTNAVVFPKANSLPARNQAPPPPPPLVVTVTVPPPVLDVSPSTSDAMSVSMDESMSSCDSFKSPDIEYVDNSDVAAVDSIERKTFSNLNISDSAESGNICSRDILVELEKGDKFINVDNNYADPQLCASFACDIYKHLRASEAKKRPSTDFMERIQKDINPSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGNVMNRQRLQLLGVASMMIASKYEEICAPQVEEFCYITDNTYFKDEVLQMESAVLNFLKFEMTAPTVKCFLRRFVRAAQGVDEVPSLQLECLTNYIAELSLLEYSMLCYAPSLIAASAIFLARFILSPSTKPWNSTLQHYTLYQPSDLCVCVKDLHRLCGNSPNSNLPAIKEKYSQHKYKYVAKKYCPPSIPQEFFLS 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01278 488 SUPERFAMILY Cyclin-like 355 480 IPR036915 -
Phco7g01278 488 PIRSF Cyclin_A_B_D_E 1 484 IPR046965 GO:0016538|GO:0044772
Phco7g01278 488 ProSitePatterns Cyclins signature. 257 288 IPR006671 -
Phco7g01278 488 SUPERFAMILY Cyclin-like 215 352 IPR036915 -
Phco7g01278 488 SMART Cyclin_C_2 355 478 IPR004367 -
Phco7g01278 488 CDD CYCLIN_AtCycA_like_rpt1 216 351 - -
Phco7g01278 488 Gene3D - 226 474 - -
Phco7g01278 488 PANTHER CYCLINS 166 466 IPR039361 -
Phco7g01278 488 SMART cyclin_7 359 447 IPR013763 -
Phco7g01278 488 SMART cyclin_7 262 346 IPR013763 -
Phco7g01278 488 MobiDBLite consensus disorder prediction 1 68 - -
Phco7g01278 488 Pfam Cyclin, N-terminal domain 226 352 IPR006671 -
Phco7g01278 488 Pfam Cyclin, C-terminal domain 355 474 IPR004367 -
Phco7g01278 488 CDD CYCLIN_AtCycA-like_rpt2 355 469 - -
Phco7g01278 488 FunFam Cyclin A1 342 474 - -
Phco7g01278 488 Gene3D - 240 353 - -
Phco7g01278 488 MobiDBLite consensus disorder prediction 1 67 - -
Phco7g01278 488 FunFam Mitotic cyclin 6 240 340 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01278 Phco-Chr7 11434305 11437502 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01278 7 11434305 11437502 Phco7g01278 7 11434305 11437502 ECH
Phco2g00807 2 8941563 8945052 Phco7g01278 7 11434305 11437502 PCT