Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00807 ATGTCGACGCAGAATCGTCGCTCGTCGTTTTCCTCCTATACGGCGTCGTCTTTGGCCAAACGACAGTCATCCGTCCTGTCGTCCGGGAAGGCTGCAAAGAGAGCGCCGCTCGCCAACATCACCAACCAGAGGATTGCGCCTTCCTCTTCTTCGGTGTCAAGCTCAATTAAAGCTTCCAAGACCAAGAAGGAGGCTCCAGCAAGAAGCAGTAGCATCACAAGATCAACAATTTGTGGGAACAACTTACCTGAGTTAAAGACTATTAACTCAAGCACAACTTTTCCAAAGGATAATTGCTTACCACGAAGGAAGGATGGTGCTCCCTCAGTTGCCAGAGTCTCTGTGCCGGTTCAGAGCACCTTTGATGTTTCTCCTAGTAAATCAGATGCGAGGTCCGTTTCTATGGATGAAACGTTGTCTTCTTCTTATTCTATCAAGAGTCCTGATGAAGTTGAATATCTGGACAACAGGGATGTCTCAACTGTTGATTCAATTCAGAGAAAGACAAACAATTTGAGCGTTTGTGATACCTCCAAGACAGAAGGTAACATATGTAGTAGGGAAATAGTTGTTGATTTGGAAAGAGAGGGCAAGGTTGTCAATATTGATAACATTTACTCGGATCCGCAGCTTTGTGCAACGTATGCTTGTGATGTTTACAAGCACCTACGTGAATCTGAGGAAAAGAAAAGGCCTTCCACCGACTTCATGGAGAGAATTCAGAATGATATAAATGTTAGCATGCGTGCAATATTGATTGACTGGCTTGTTGAGGTGGCTGAGGAGTATCGCCTTGTACCTGATACATTGTATTTGACAGTGAACTACATTGATCGGTATCTTTCAGGGAAGGCCATGAATAGGCAAAGATTACAATTACTTGGTGTTTCCTGTATGATGATTGCCTCTAAATATGAGGAGATTTCTGCACCACAGGTGGAGGATTTTTGTTATATAACTGATAATACGTACTTAAAAGAAGAGCTTTTACGAATGGAATCTGCTGTTTTGAATTATCTTAAGTTCGAAATGACGGCCCCAACAGTTAAATGTTTCTTAAGACGATTTGTTCGTGTAGCAGCTCATGATGTCCAAGAGGTACCTTCACTTCAACTGGAGTGCCTAACCAACTTTATTGCCGAATTGTCGCTCTTGGAGTACAGCATGCTGTCTTATCCTCCATCACTGATAGCTGCTTCAGCAACTTTTCTTGCCAGATTTATACTTTTCCCTTCAAAGAAACCATGGAATTCCATATTGCAGCATTACGCACAATACCGGCCTTCTGATTTGTGTGCTTGTGTGAAAGATCTCCATCGCCTTTGTTGCAGCAGTAGCGATACTTCTAATTTACCTGCTATCCGAGAGAAATACAGTCAGCACAAGTACAAATGTGTGGCCAAGAAGTACATCCCTCTCTCAATACCGCAAGAAGTTTTCCGGAATTGA 1449 0.4293 MSTQNRRSSFSSYTASSLAKRQSSVLSSGKAAKRAPLANITNQRIAPSSSSVSSSIKASKTKKEAPARSSSITRSTICGNNLPELKTINSSTTFPKDNCLPRRKDGAPSVARVSVPVQSTFDVSPSKSDARSVSMDETLSSSYSIKSPDEVEYLDNRDVSTVDSIQRKTNNLSVCDTSKTEGNICSREIVVDLEREGKVVNIDNIYSDPQLCATYACDVYKHLRESEEKKRPSTDFMERIQNDINVSMRAILIDWLVEVAEEYRLVPDTLYLTVNYIDRYLSGKAMNRQRLQLLGVSCMMIASKYEEISAPQVEDFCYITDNTYLKEELLRMESAVLNYLKFEMTAPTVKCFLRRFVRVAAHDVQEVPSLQLECLTNFIAELSLLEYSMLSYPPSLIAASATFLARFILFPSKKPWNSILQHYAQYRPSDLCACVKDLHRLCCSSSDTSNLPAIREKYSQHKYKCVAKKYIPLSIPQEVFRN 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00807 482 MobiDBLite consensus disorder prediction 41 72 - -
Phco2g00807 482 FunFam Mitotic cyclin 6 232 332 - -
Phco2g00807 482 Gene3D - 218 468 - -
Phco2g00807 482 FunFam Cyclin A1 334 468 - -
Phco2g00807 482 SUPERFAMILY Cyclin-like 347 472 IPR036915 -
Phco2g00807 482 CDD CYCLIN_AtCycA-like_rpt2 347 463 - -
Phco2g00807 482 CDD CYCLIN_AtCycA_like_rpt1 208 343 - -
Phco2g00807 482 MobiDBLite consensus disorder prediction 1 29 - -
Phco2g00807 482 Pfam Cyclin, C-terminal domain 347 468 IPR004367 -
Phco2g00807 482 Pfam Cyclin, N-terminal domain 218 344 IPR006671 -
Phco2g00807 482 Gene3D - 232 345 - -
Phco2g00807 482 PANTHER CYCLINS 152 466 IPR039361 -
Phco2g00807 482 SMART Cyclin_C_2 347 472 IPR004367 -
Phco2g00807 482 ProSitePatterns Cyclins signature. 249 280 IPR006671 -
Phco2g00807 482 SUPERFAMILY Cyclin-like 207 344 IPR036915 -
Phco2g00807 482 SMART cyclin_7 351 440 IPR013763 -
Phco2g00807 482 SMART cyclin_7 254 338 IPR013763 -
Phco2g00807 482 PIRSF Cyclin_A_B_D_E 1 478 IPR046965 GO:0016538|GO:0044772
Phco2g00807 482 MobiDBLite consensus disorder prediction 1 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00807 Phco-Chr2 8941563 8945052 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00807 2 8941563 8945052 Phco2g00807 2 8941563 8945052 ECH
Phco2g00807 2 8941563 8945052 Phco7g01278 7 11434305 11437502 PCT