Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01252 ATGATAAAGGGTTACCATTACTTTACATTGAAGTTTGTTCACCCCCTAAAGAAATCTAAAAAGCTACGGTTCTATATTCTTCCACTCAAATATCCCAGTCGCATTGATTTGTTACAAGCCCACCAACTAAATTGGAACACCCTTTCTCCTTCAATGGAAGGTGAGGAGGGAAAACAGTGCTCCCACAAAAACCCTTATGTTGAACTAGAAGAAGTTGACTTCGATTTTATTCTAGCATTGAGTATGCAAGAACAACAGAGAGACTTCACAATGCTTTCAACTATTGAAAGTGAAAGTGATGAATATCTAACTGACTCCTCAATTGAGAATGATGATGATGGTGATCCGGACTTCGTAGAGAGCCAAGAGTTTGATACTGACCTTCAGTTTCTTGAAGAAGAAGAAAGCAATGACAATGATGAAGAAGAAGAAATGGAAGTCGAAGAAGATGAGATTGATCCAGACGAATTATCTTATGAAGAGTTGATGGAGTTGGGAGAGTTTATAGGAGAAGAAACGAGAGGATTATCAGCAAATGAAATCTCTTTGTACCTGAACCCCTATACTTACCATTGTGCTGAAAGAAAAATTGGAATCGATCGTTGTGTGATTTGTCAGGTTGAATATGAAGATGGTGAAGCACTGGTGGCACTTCAATGTGAGCACGCTTATCATGCAGATTGCATAAGCAAGTGGCTTCAAATTAAGAAGGTTTGTCCAATTTGTAGCAATGAAGTTTCAACTCCAAACATGGCTTCGAACACTTAA 768 0.3841 MIKGYHYFTLKFVHPLKKSKKLRFYILPLKYPSRIDLLQAHQLNWNTLSPSMEGEEGKQCSHKNPYVELEEVDFDFILALSMQEQQRDFTMLSTIESESDEYLTDSSIENDDDGDPDFVESQEFDTDLQFLEEEESNDNDEEEEMEVEEDEIDPDELSYEELMELGEFIGEETRGLSANEISLYLNPYTYHCAERKIGIDRCVICQVEYEDGEALVALQCEHAYHADCISKWLQIKKVCPICSNEVSTPNMASNT 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01252 255 MobiDBLite consensus disorder prediction 102 120 - -
Phco7g01252 255 FunFam E3 ubiquitin ligase BIG BROTHER-related 168 249 - -
Phco7g01252 255 Coils Coil 128 151 - -
Phco7g01252 255 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 183 252 IPR013083 -
Phco7g01252 255 PANTHER E3 UBIQUITIN LIGASE BIG BROTHER-RELATED 55 147 IPR043312 -
Phco7g01252 255 Pfam Ring finger domain 201 242 IPR001841 -
Phco7g01252 255 MobiDBLite consensus disorder prediction 133 153 - -
Phco7g01252 255 SUPERFAMILY RING/U-box 201 249 - -
Phco7g01252 255 ProSiteProfiles Zinc finger RING-type profile. 202 243 IPR001841 -
Phco7g01252 255 SMART ring_2 202 242 IPR001841 -
Phco7g01252 255 MobiDBLite consensus disorder prediction 100 120 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01252 Phco-Chr7 11104105 11104872 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01252 7 11104105 11104872 Phco2g00812 2 8990236 8990838 PCT