Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01153 ATGGCCCTCAGCCTAACCTTTGCAACCATCATTTTCCTCACTCTTCACACTGCTCACTCATCTAACCCACCATTCGCTTGCGATTGGTCAAACCCTTCCTCCAGATCCTACCCATTCTGCAACCCCAAACTCCCCATCCCCCAACGAACCAAAGACCTTCTCTCCAGACTCTCACTCCAAGAGAAACTCTCCCAACTCGTCAACGCCGCGCCTTCCATCCCCCGCCTCGGCATCCCCGCCTACCAGTGGTGGAGCGAGGCCCTTCATGGCGTAGGAAGCGTTGGCCCCGGCATCCGCTTCAACGCCTCCATCTCCTCCGCCACCAGCTTCCCTCAGGTCATCCTCAGCGCAGCCACCTTCGACTCCCTCCTCTGGTACCGCATCGGACGCGCCATTGGGATCGAAGCCCGCGCAATCTATAATGCAGGCCAGGCCCAGGGGCTCACCTTCTGGGCTCCCAATATTAACATCTTCAGGGACCCGCGATGGGGCCGAGGACAAGAGACACCCGGCGAAGACCCTCTCCTCACTTCCGGCTACGCAGTTTCCTACGTCAGAGGCCTCCAAGGAGACTCCTTTCACGGAGGCAAGTTGAGGGGCCACCTTCAAGCCTCCGCCTGCTGCAAACACTTCACGGCTTACGATCTTGACAATTGGAAGGGCGTGGATCGCTTTCTCTTCGATGCTCGCGTGAGTTTGCAAGATTTAGCGGACACATACCAGCCTCCGTTTCAGAGTTGCGTACAGCAAGGAGGGGCCAGTGGGATCATGTGTGCTTACAACCGCGTGAACGGAGTTCCGAGCTGTGCGGATTTCAACCTGTTAACCAAAACGGCCAGAAAAGAATGGCATTTCCGTGGCTATATTACGTCGGATTGTGGAGCAGTGGGGATCATACATGACCAGCAAGGATTTGCAAAATCAGCGGAGGATGCTGTAGCTGATGTTCTTCGTGCTGGGATGGACGTGGAATGTGGTACTTATTTGACGGATCATGCTAAATCCGCAGTGTTGCAGAAAAAAGTATCCTTGTCTCAAATAGACCGTGCCCTTCACAACCTGTTTTCTATTAGAATGAGGCTAGGCCTGTTTGATGGAAATCCAAGCAGTCTTCCATTTGGCATGATTGGTCCCAATCATGTCTGTTCCAAAGAGCACCAATATCTGGCTCTTGAAGCTGCAAGAAATGGCATTGTCCTCTTAAAAAACTCTCCCACACTTCTACCACTTCCAAAAACAAGCCCCAGCATTTCCTTAGCAGTGATAGGTCCCAATGCCAATGCTTCTCCACTAACTCTTCTTGGAAACTATGCTGGCCCTCCTTGTAAATTTGTGACCATATTGCAAGGGTTTCAGCACTACGTTAAGAACGCCGTTTATCATCCTGGCTGTGATGGTGGACCAAAGTGTTCTTCGGCTCAAATTGAGCAGGCAGTGGAAGTTGCAAAAAAAGTGGATTATGTGGTGCTGGTTATGGGATTGGATCAAAGTGAAGAGAGGGAAGAACGTGATCGCGTTCATCTAGACTTGCCAGGCAAGCAACTTGAACTCGTCAACAGCGTTGCTGAAGCTTCTAAGAAACCAGTTATTTTGGTGCTGCTTTGTGGAGGGCCTGTAGATATCAGTTCAGCCAAGTATAACCACAAAATTGGAGGCATCCTCTGGGCTGGTTATCCCGGAGAACTTGGAGGCATTGCACTTGCACAGATTATCTTTGGTGACCACAACCCAGGAGGAAGACTGCCAGTTACTTGGTACCCAAAAGATTACATCAAAGTACCCATGACAGACATGAGAATGAGAGCTGATCCTTCTACAGGCTATCCTGGGAGAACTTACCGATTTTACAAAGGTCCAAAAGTGTATGACTTTGGCTATGGACTAAGCTACTCAAAGTATTCCTATGAGTTTGTTTCTGTTACACATGCCAAGCTTCACTTGAACCAATCATCCACTCATGTCATGGTTGAAAATTCTGAAACAGTAAGGTACAAACTAGTTTCGGAGTTGGGAGAACAAACCTGCCAAAGCATGTCACTCTCGGTCACAGTGAGAGTTCAAAATCATGGAAGCATGGTAGGGAAGCATCCTGTATTGCTGTTTATGAGGCCTAAAAACCAGAAAAATGGAAACCCTGTGAAACAGTTGGTTGGTTTCCAGAGTGTGATGCTTGATGCAGGGGAAATGACTCATGTTGGATTCGCGGTAAGTCCTTGTGAACATCTTAGTAGAGCAAATGAAGCTGGTGCAATGATTATTGAAGAAGGGTCTCAGGTGTTGCTTGTGGATGATCAAGAACACCCAATTGATATAACTGTTTGA 2322 0.491 MALSLTFATIIFLTLHTAHSSNPPFACDWSNPSSRSYPFCNPKLPIPQRTKDLLSRLSLQEKLSQLVNAAPSIPRLGIPAYQWWSEALHGVGSVGPGIRFNASISSATSFPQVILSAATFDSLLWYRIGRAIGIEARAIYNAGQAQGLTFWAPNINIFRDPRWGRGQETPGEDPLLTSGYAVSYVRGLQGDSFHGGKLRGHLQASACCKHFTAYDLDNWKGVDRFLFDARVSLQDLADTYQPPFQSCVQQGGASGIMCAYNRVNGVPSCADFNLLTKTARKEWHFRGYITSDCGAVGIIHDQQGFAKSAEDAVADVLRAGMDVECGTYLTDHAKSAVLQKKVSLSQIDRALHNLFSIRMRLGLFDGNPSSLPFGMIGPNHVCSKEHQYLALEAARNGIVLLKNSPTLLPLPKTSPSISLAVIGPNANASPLTLLGNYAGPPCKFVTILQGFQHYVKNAVYHPGCDGGPKCSSAQIEQAVEVAKKVDYVVLVMGLDQSEEREERDRVHLDLPGKQLELVNSVAEASKKPVILVLLCGGPVDISSAKYNHKIGGILWAGYPGELGGIALAQIIFGDHNPGGRLPVTWYPKDYIKVPMTDMRMRADPSTGYPGRTYRFYKGPKVYDFGYGLSYSKYSYEFVSVTHAKLHLNQSSTHVMVENSETVRYKLVSELGEQTCQSMSLSVTVRVQNHGSMVGKHPVLLFMRPKNQKNGNPVKQLVGFQSVMLDAGEMTHVGFAVSPCEHLSRANEAGAMIIEEGSQVLLVDDQEHPIDITV 773
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01153 773 Pfam Glycosyl hydrolase family 3 N terminal domain 103 354 IPR001764 GO:0004553|GO:0005975
Phco7g01153 773 Gene3D - 383 631 IPR036881 GO:0004553|GO:0005975
Phco7g01153 773 FunFam probable beta-D-xylosidase 7 49 370 - -
Phco7g01153 773 Pfam Glycosyl hydrolase family 3 C-terminal domain 398 630 IPR002772 GO:0004553|GO:0005975
Phco7g01153 773 Gene3D Immunoglobulins 658 773 IPR013783 -
Phco7g01153 773 Pfam Fibronectin type III-like domain 698 763 IPR026891 -
Phco7g01153 773 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 398 633 IPR036881 GO:0004553|GO:0005975
Phco7g01153 773 PANTHER SUGAR HYDROLASE-RELATED 20 769 IPR044993 GO:0009044|GO:0045493
Phco7g01153 773 SUPERFAMILY (Trans)glycosidases 37 396 IPR017853 -
Phco7g01153 773 Gene3D - 49 370 IPR036962 GO:0004553|GO:0005975
Phco7g01153 773 PRINTS Glycosyl hydrolase family 3 signature 204 220 IPR001764 GO:0004553|GO:0005975
Phco7g01153 773 PRINTS Glycosyl hydrolase family 3 signature 278 296 IPR001764 GO:0004553|GO:0005975
Phco7g01153 773 PRINTS Glycosyl hydrolase family 3 signature 110 129 IPR001764 GO:0004553|GO:0005975
Phco7g01153 773 FunFam probable beta-D-xylosidase 7 664 772 - -
Phco7g01153 773 FunFam probable beta-D-xylosidase 2 383 631 - -
Phco7g01153 773 SMART Fn3_like_2 696 766 IPR026891 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01153 Phco-Chr7 9923587 9928066 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01153 7 9923587 9928066 Phco7g01153 7 9923587 9928066 ECH
Phco3g01317 3 12613327 12617844 Phco7g01153 7 9923587 9928066 PCT