Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01145 ATGCCCCTGCTTTTCAAGTGTATGCTTAAGGTTATTAACACGTTGATTGCCGTGACAGCGTCCATTTCAAACTCAACCGTGTTACCAAGTGCAACCTTGCCACAATCCATGGCTGTGCTTAGCGGGTTTTGGGGCCTGCCCCATAAGAATCTTGTGAAAAGGTTGGAAGGAGCTAAAGTTGGTGCTTGGATTGATTCAATGAGAGCCTCTTCCCCAAATCGTGCTAAATCAGAAAGCCAAGAAAAAAGATCTTGGATTCTTTATCACCCTTCAGCTCTGAACACCTTTGAGCAAATAACATATAATTCCAAAGGCAAGCAGATTGTAGTTTTTCTTGACTACGATGGAACTCTCTCCCCTATAGTTACAGATCCGGATAAAGCTTTCATGAGCAGAAAGATGAGAGCGACGCTTAAGGGAATCGCAAGACATTTTCCCACAGCAATCGTGACCGGGAGGTGCAGGGACAAGGTCTATAACTTTGTAAAACTGGCAGAACTTTACTACGCCGGGAGCCACGGCATGGACATCAAGGGGCCAACAAAAAGCCGAAGTGGAAAGCAAGGTAACAATAAAGGTGTACTGTTCCAACCCGCGAGTCAATTCCTGGCCATGATCGATGAGGTGTACAAGATCTTGTTAGAAAGAACAAAGTCTGTCCCAGGGGCTAAGGTCGAGAACAATAAGTTTTGCTTGTCCGTTCACTTTCGTTGTGTTGACGAAAAGAGTTGGGCATCCTTGGCGGACAAAGTTAGATTGGTGCTCAATGAGTACCCACAACTTAAGCTAACCCAAGGGAGAAAAGTGCTAGAGATTCGTCCAACCATCAAATGGGACAAGGGCAAGGCTCTTGAATTTTTGTTACAATCATTAGGATACGAGAATTCGAATGATGTATTTCCAATCTATATTGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGCGCAGTAGGGGTCAAGGAATTGGGATACTTGTTTCTAGAGTTGCAAAAGAAACAGATGCTTCCTATACCTTGCAAGATCCATCAGAGGTTGAGCAATTCTTGGGGCGATTGGTGGAGTGGAAAAGATCGAGTAGTGTGAAGTGTATAGAGTTGTAG 1107 0.4417 MPLLFKCMLKVINTLIAVTASISNSTVLPSATLPQSMAVLSGFWGLPHKNLVKRLEGAKVGAWIDSMRASSPNRAKSESQEKRSWILYHPSALNTFEQITYNSKGKQIVVFLDYDGTLSPIVTDPDKAFMSRKMRATLKGIARHFPTAIVTGRCRDKVYNFVKLAELYYAGSHGMDIKGPTKSRSGKQGNNKGVLFQPASQFLAMIDEVYKILLERTKSVPGAKVENNKFCLSVHFRCVDEKSWASLADKVRLVLNEYPQLKLTQGRKVLEIRPTIKWDKGKALEFLLQSLGYENSNDVFPIYIGDDRTDEDAFKVLRSRGQGIGILVSRVAKETDASYTLQDPSEVEQFLGRLVEWKRSSSVKCIEL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01145 368 NCBIfam trehalose-phosphatase 106 355 IPR003337 GO:0003824|GO:0005992
Phco7g01145 368 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 50 363 IPR044651 GO:0004805|GO:0005992
Phco7g01145 368 Pfam Trehalose-phosphatase 111 345 IPR003337 GO:0003824|GO:0005992
Phco7g01145 368 Gene3D - 215 365 IPR023214 -
Phco7g01145 368 Gene3D - 108 207 IPR023214 -
Phco7g01145 368 FunFam Trehalose 6-phosphate phosphatase 205 364 - -
Phco7g01145 368 NCBIfam HAD-IIB family hydrolase 110 319 IPR006379 -
Phco7g01145 368 SUPERFAMILY HAD-like 109 357 IPR036412 -
Phco7g01145 368 CDD HAD_TPP 109 347 - -
Phco7g01145 368 FunFam Trehalose 6-phosphate phosphatase 108 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01145 Phco-Chr7 9834362 9838691 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01145 7 9834362 9838691 Phco7g01145 7 9834362 9838691 ECH
Phco3g01308 3 12499515 12501593 Phco7g01145 7 9834362 9838691 PCT