Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01308 ATGACGAACCGTAATGTGAATAACACTCTTCTGGAGTTGGCAATGTCGATTTCAAACTCAAGTGCTCTACCTAGAGCTGCAGTGCCTGGAATAATGGCTTTGCTTGGTGGGGTTTTAGGCCTACCCCAGAAAAAGTTCTTATTGAAAACTTTGGAGGATGGAAGTGGAAAAGGAGGAACCAAAGTTAACACATGGATTGATTCAATGAGAGCTTCTTCTCCCACTCGAGTCAAATCCACACAGAACCAAGACCTGAGTCCTTGGACTCTTTACCACCCTTCGGCACTGAACCTGTTTGATCAGATTATATGTGAGTCCAAAGGGAAGCAGATTGTCACTTTTCTTGACTATGATGGAACTCTCTCCCCAATTGTTGCAGACCCAGATAAAGCATACATGAGTCAAAAGATGAGGGCCACATTGAAGGACATAGCAAGGCATTTCCCCACTGCCGTCGTGAGTGGAAGGTGCATAGACAAGGTGTATAGCTTTGTGAGATTGGCAGAACTGTACTATGCTGGGAGCCATGGAATGGACATCAAGGGACCAACAAATAGGCGAAGTACTAAGAAAGGAAACGAAGCAGTACTCTTCCAACCCGCGAGTGAATTCTTACCCATGATCAATGAGGTGTACAACATCTTGGTGGATAAAACAAAGGCTGTCCCGGGGGCTAAGGTAGAAAATAACAAGTTTTGTTTGTCCGTGCACTTTCGCTGTGTTGACGAAAAGAGTTGGGCATCATTGGCTGAGCAAGTGAGCTTGGTCCTCGAACACTACCCCAAACTTAAGCTAACTCAAGGCAGAAAAGTGCTTGAGATTCGACCAACCATAAAATGGGACAAGGGCAAGGCTCTTGAATTCTTGCTAGAATCACTTGGATATGGTAACTCTGATAATGTATTTCCAATCTATATTGGTGATGATCGAACTGACGAAGATGCTTTTAAGGTTTTACGGAAGAGGGGTCAAGGGATTGGGATTCTTGTTTCTAAAATTCCAAAAGAAACCGATGCTTCCTACACTTTGCAAGATCCAACTGAGGTTGGGCAGTTTTTGCGGCATTTGGTGGAGTGGAAAAGAACGAGTACCCAATACCACAAGTTGTAG 1110 0.4423 MTNRNVNNTLLELAMSISNSSALPRAAVPGIMALLGGVLGLPQKKFLLKTLEDGSGKGGTKVNTWIDSMRASSPTRVKSTQNQDLSPWTLYHPSALNLFDQIICESKGKQIVTFLDYDGTLSPIVADPDKAYMSQKMRATLKDIARHFPTAVVSGRCIDKVYSFVRLAELYYAGSHGMDIKGPTNRRSTKKGNEAVLFQPASEFLPMINEVYNILVDKTKAVPGAKVENNKFCLSVHFRCVDEKSWASLAEQVSLVLEHYPKLKLTQGRKVLEIRPTIKWDKGKALEFLLESLGYGNSDNVFPIYIGDDRTDEDAFKVLRKRGQGIGILVSKIPKETDASYTLQDPTEVGQFLRHLVEWKRTSTQYHKL 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01308 369 NCBIfam trehalose-phosphatase 109 357 IPR003337 GO:0003824|GO:0005992
Phco3g01308 369 FunFam Trehalose 6-phosphate phosphatase 207 366 - -
Phco3g01308 369 Gene3D - 111 196 IPR023214 -
Phco3g01308 369 Gene3D - 214 368 IPR023214 -
Phco3g01308 369 Pfam Trehalose-phosphatase 114 346 IPR003337 GO:0003824|GO:0005992
Phco3g01308 369 SUPERFAMILY HAD-like 114 360 IPR036412 -
Phco3g01308 369 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 55 367 IPR044651 GO:0004805|GO:0005992
Phco3g01308 369 NCBIfam HAD-IIB family hydrolase 114 321 IPR006379 -
Phco3g01308 369 CDD HAD_TPP 114 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01308 Phco-Chr3 12499515 12501593 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01308 3 12499515 12501593 Phco7g01145 7 9834362 9838691 PCT