Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01109 ATGAGTGAGACAGCAAGTCTTCATGCACAAACAAGGACGCCCATTTCTTCTCTGGAAGCCATGGCCCATCACCACCCGCATTATCGGTCACCCTTCGGAGACACAACCTTCACCAAACTGTTCGTGGGAGGACTAGCCTGGGAGACTCCCACCGAAGAAATGCGCAAATATTTCCAGCAGTTCGGCGACATTCTTGAAGCTGTCATAATCACTGACAAGAACACCGGAAAATCCAAAGGCTACGGATTCGTAACATTCTGCGACCAAGAATCAGCTAGAAGAGCATGTGCTGATCCAAATCCAATAATAGATGGCAGAAGAGCAAATTGTAATATTGCTTCTCTGGGAAGGACTCGACCTTCACCACCTCGAGGGAGGAATACAGTTCAAGGTGGAGGAGGAACAGCACAGAGTGTTCCGGGAGCGGGACCGCCGCCGTCGCTGCCGCCAGCACCTGCTGTTCTGTATCCTCCATATGGCTATACAACCTACACTCCTGATTATGGATACCACCACCAAGCCACATTGTACAACCCACAGATTCAGCAACCACAATACTATCAACAACTCTATGGAGCATCATCTTCCACCATGAGCACCCCATATTACTATGGTTACTCTGTGCAAGCACCAAGAAGCACATTTTCCTCACCCCAGGCAAATCGCCTATCACCTGGACCATCTTATCTGTACTATCCTACACCCGTGGAAGTCTCATTCTCTGGATATCGCCCACTCCAACAATCACCAATGAGCCAAAACTTTCCTTCTCCAAGTGATTCACAGAGTCAGCAGCGTATCTCCTCTGAAACAGCAGCCACTTCAGAAAGTTCAAATACCCAAGGGAAGAGCTAA 855 0.4877 MSETASLHAQTRTPISSLEAMAHHHPHYRSPFGDTTFTKLFVGGLAWETPTEEMRKYFQQFGDILEAVIITDKNTGKSKGYGFVTFCDQESARRACADPNPIIDGRRANCNIASLGRTRPSPPRGRNTVQGGGGTAQSVPGAGPPPSLPPAPAVLYPPYGYTTYTPDYGYHHQATLYNPQIQQPQYYQQLYGASSSTMSTPYYYGYSVQAPRSTFSSPQANRLSPGPSYLYYPTPVEVSFSGYRPLQQSPMSQNFPSPSDSQSQQRISSETAATSESSNTQGKS 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01109 284 MobiDBLite consensus disorder prediction 242 284 - -
Phco7g01109 284 PANTHER BOULE-RELATED 16 270 - -
Phco7g01109 284 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40 97 IPR000504 GO:0003723
Phco7g01109 284 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 38 115 IPR000504 GO:0003723
Phco7g01109 284 MobiDBLite consensus disorder prediction 121 135 - -
Phco7g01109 284 SUPERFAMILY RNA-binding domain, RBD 21 139 IPR035979 GO:0003676
Phco7g01109 284 Gene3D - 5 135 IPR012677 -
Phco7g01109 284 SMART rrm1_1 39 111 IPR000504 GO:0003723
Phco7g01109 284 FunFam RNA-binding protein 24-B isoform X1 25 134 - -
Phco7g01109 284 CDD RRM_RBM24_RBM38_like 38 113 - -
Phco7g01109 284 MobiDBLite consensus disorder prediction 113 150 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01109 Phco-Chr7 9395973 9400060 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01109 7 9395973 9400060 Phco7g01109 7 9395973 9400060 ECH
Phco3g01287 3 12047358 12051758 Phco7g01109 7 9395973 9400060 PCT