Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01104 ATGGCCACCACCGCTTACAACTCTCTCCTTCCAACCAAATCCATTCTTCCAACCCACCCTCTCCTGCATTCCTCCACTACTCAATGCTACTCCGTTGCCGGGCCCAAGCCCAGGCCCATCCAATCCGTTCACGCGGCCGACAAGCCCGTCAATGTAGTAACCGACGGCAAACAGCAGCAACCGAGGCATGAGGTAAAGTGGGCTGTGGAAAGCTGGAAGTCCAAAAAGGCCCAGCAGCTCCCGGAATACCCGAACCAAGAGAAGCTCCAGGAGGTGCTCAAGAGCCTCGAAACGTTCCCTCCTATCGTATTCGCCGGAGAGGCTCGCAATCTGGAGGAGCGCCTCGCCGATGCCGCCGTGGGGAATGCGTTCCTCCTCCAGGGCGGAGACTGCGCCGAGAGCTTCAAGGAGTTTCACGCCAACAACATCCGCGACACCTTCAGAATCATCCTCCAGATGAGTGTGGTTATGATGTTCGGTGGTCAGATGCCCGTTATTAAGGTGGGACGAATGGCGGGTCAGTTCGCGAAACCGAGATCGGAGCAGTTGGAGGAGAAGAACGGGGTAAAACTCCCCAGTTACAGAGGCGATAACGTGAACGGAGATGCGTTCGAGGAGAAAGCCAGAATTCCTGATCCTGAAAGGATGATTAGAGCATATAGTCAATCCGCTGCCACTCTGAATCTTCTCAGGGCATTCGCAACGGGAGGCTACGCCGCTATGCAAAGGGTTGGTCAATGGAATTTGGACTTCACAGAGCACAGCGAACAAGGAGACAGGTACCTAGACTTTGCACACCGAGTCGATGAGGCCCTTGGTTTCATGGCTGCTGCAGGCCTCACGGTGGAGCATCCTATAATGAAAACAACTGAGTTCTGGACCTCACATGAATGTCTGTTGTTGCCATATGAACAATCACTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGACTGCTCCGCGCATATGCTCTGGGTTGGGGAACGGACCAGGCAGCTGGATGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCCAATCCTCTTGGAATCAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAGACTGATCAACATCTTGAACCCCCAAAACAAACCAGGGAGAATATCTGTGATCACGAGGATGGGAGCTGAAAATATGAGGGTCAAGCTTCCACGTCTGATCAGGGCAGTACGCAGAGCTGGACATACTGTAACTTGGGTCAGTGATCCTATGCATGGAAACACCATAAAGGCTCCGTGTGGACTCAAAACTCGTCCCTTTGATGCCATCAGGGCGGAGGTGAAAGCATTCTTCGACGTGCATGAACAGGAAGGAAGCCACCCAGGTGGGGTTCATCTAGAGATGACGGGCCAGAATGTGACTGAGTGCATTGGTGGGTCAAGAACTGTCACCTTTGATGATCTGGGCTCACGTTACCACACACACTGTGATCCCAGGCTTAATGCTTCACAATCTCTTGAGCTTGCTTTCATCATTTCTGAACGCCTCCGGAAGCGTAGGATCGGATCGGATGGCGGCAGTATCTTTTCTCTCTAG 1566 0.5223 MATTAYNSLLPTKSILPTHPLLHSSTTQCYSVAGPKPRPIQSVHAADKPVNVVTDGKQQQPRHEVKWAVESWKSKKAQQLPEYPNQEKLQEVLKSLETFPPIVFAGEARNLEERLADAAVGNAFLLQGGDCAESFKEFHANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSEQLEEKNGVKLPSYRGDNVNGDAFEEKARIPDPERMIRAYSQSAATLNLLRAFATGGYAAMQRVGQWNLDFTEHSEQGDRYLDFAHRVDEALGFMAAAGLTVEHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVRLINILNPQNKPGRISVITRMGAENMRVKLPRLIRAVRRAGHTVTWVSDPMHGNTIKAPCGLKTRPFDAIRAEVKAFFDVHEQEGSHPGGVHLEMTGQNVTECIGGSRTVTFDDLGSRYHTHCDPRLNASQSLELAFIISERLRKRRIGSDGGSIFSL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01104 521 SUPERFAMILY Aldolase 58 507 - -
Phco7g01104 521 Pfam Class-II DAHP synthetase family 67 503 IPR002480 GO:0003849|GO:0009073
Phco7g01104 521 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 40 513 IPR002480 GO:0003849|GO:0009073
Phco7g01104 521 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 256 508 - -
Phco7g01104 521 Gene3D Aldolase class I 253 508 IPR013785 -
Phco7g01104 521 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 67 510 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01104 Phco-Chr7 9349549 9354165 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01104 7 9349549 9354165 Phco7g01104 7 9349549 9354165 ECH
Phco3g01274 3 11773569 11777916 Phco7g01104 7 9349549 9354165 PCT