Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01274 ATGTTAGCTGGGTCGTTCACTCTCCTCCACGCAACGCCGCCAACTCACCTACGCCCAAATAAGGGGCGATTAGTAGGTGAAGAGGAGAAAACAATCAAAAACACCAAAACCCTAAAAAATTTGACCTCATTGCCAACTAGCACGCCCAACCATTCCGAAATTACCAAACCACCCTTCTCCCAACTACCACCATTCCGTCTCTACCAGACACACACAAACACACCGCAACAACCCAGCCTCAGACGTCTCCTTATAAATCTCTCACCAAACTCCCCTCACCCTCTTCACCACCCACAAAACCTGTGTGACTCCTCACATCCAAAAAATCAAACACCATTACTGCAACATCATTACCATTTTCTCTCTCTCTCTCTCTCCACAATAACAATGGCAATCTCCTCAACCTCCAACTCTCTCATTCCCACCAAATCTCTCATTCCTCAATCCCACCCGCTTCTTCCCTCCACCAACATCAGGCCTGGCCTCAAGTCCAAGCCCGGCCCAACTCCTTCCATCTTTGCCGTCCATGCGGCCGAGCCCGCTAAAAACCCCGTAGTCTCTGACAAGCCCAAGCCCCAGTCCCCCCCTCCGCCGGCCCCGGCCCGGGCCGGAAAGTGGGCCGTGGACAGCTGGAAGGCGAAGAAGGCACTGCAGCTGCCCGAGTACCCGAGCAAGGAGGATCTGGAGTCCGTTCTCCACACGCTCGAGGCGTTTCCGCCTATCGTCTTCGCCGGCGAGGCCCGGACGCTGGAGGAGCACCTGGGCGAAGCTGCTCTCGGAAATGCCTTCCTACTTCAAGGCGGTGACTGCGCCGAAAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGAATCATCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAATGCCCGTCATTAAGGTGGGGCGAATGGCTGGGCAGTTTGCGAAGCCGAGATCCGATTCATTTGAGGAGAAGAACGGCGTGAAGCTTCCGAGTTACAGAGGGGATAATATTAACGGAGACGCGTTTGATGAGAAGTCTAGGATTCCGGATCCGCAGAGGATGATCAGGGCTTATTGTCAAGCTGCAGCTACGCTTAATCTTCTCAGAGCTTTCGCCACTGGAGGTTATGCCGCTATGCAGAGGGTTACTCAATGGAATTTGGACTTCACCCAGCACAGTGAACAGGGAGATAGGTACCGTGAGCTTGCTAACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTGCTGGGCTCACAGTGGACCATCCAATCATGAAAACAACCGAATTCTGGACATCTCATGAGTGCTTATTGTTGCCATATGAACAATCCCTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGATTGCTCAGCCCATATGCTTTGGGTTGGAGAACGAACCAGACAACTGGATGGTGCCCATGTTGAGTTTCTTAGAGGAGTTGCTAACCCCTTGGGAATCAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTTAAACTCATTGAGATCTTGAATTCCCAAAACAAACCAGGGAGAATAACTGTGATTACTAGGATGGGAGCTGAAAATATGAGGGTGAAACTTCCCCATCTCATCAGGGCAGTGCGCAGGGCAGGGCAAATTGTCACTTGGGTCAGTGATCCTATGCACGGAAACACCATTAAGGCTCCCTGTGGTCTTAAAACTCGCCCCTTCGATTCCATCAGGGCTGAAGTGAGAGCATTCTTCGATGTGCACGAGCAAGAAGGAAGCCACGCAGGAGGGGTTCATCTAGAGATGACGGGTCAAAATGTGACTGAGTGCATTGGTGGATCAAGAACAGTGACATTTGATGACTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCCCTTGAGCTTGCTTTCATCATCGCTGAACGTTTGAGAAAGAGCAGGATGAGATCGCAGCAAGCAACTGCCCCTCTAGGACTGTAA 1986 0.5136 MLAGSFTLLHATPPTHLRPNKGRLVGEEEKTIKNTKTLKNLTSLPTSTPNHSEITKPPFSQLPPFRLYQTHTNTPQQPSLRRLLINLSPNSPHPLHHPQNLCDSSHPKNQTPLLQHHYHFLSLSLSTITMAISSTSNSLIPTKSLIPQSHPLLPSTNIRPGLKSKPGPTPSIFAVHAAEPAKNPVVSDKPKPQSPPPPAPARAGKWAVDSWKAKKALQLPEYPSKEDLESVLHTLEAFPPIVFAGEARTLEEHLGEAALGNAFLLQGGDCAESFKEFNANNIRDTFRIILQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDAFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTQHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNSQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHAGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRMRSQQATAPLGL 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01274 661 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 395 647 - -
Phco3g01274 661 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 206 648 IPR002480 GO:0003849|GO:0009073
Phco3g01274 661 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 171 655 IPR002480 GO:0003849|GO:0009073
Phco3g01274 661 MobiDBLite consensus disorder prediction 147 204 - -
Phco3g01274 661 SUPERFAMILY Aldolase 201 646 - -
Phco3g01274 661 Gene3D Aldolase class I 390 647 IPR013785 -
Phco3g01274 661 Pfam Class-II DAHP synthetase family 206 642 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01274 Phco-Chr3 11773569 11777916 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01274 3 11773569 11777916 Phco3g01274 3 11773569 11777916 ECH
Phco3g01274 3 11773569 11777916 Phco7g01104 7 9349549 9354165 PCT