Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01086 ATGGCTCAGCAGAAGCGGTTAAAAACTTTCACCCAAAACCTCAAAGACAAAGCCTCGGTCATCGCCGCTGTACTATCCCCCAAGCGCCACGTGTCCTCCGTCCGGGTGCACGTGCTCCGCGCCACTACACACGCACTCACGGCGCCTCCCTCCGAGGAAACCATCGCCGCCGTACTCGCGGTGGGACAGGGCTCCGACCGCAACCCGCGCGCCTGCATCGACGCGATCATGGACCGCCTGCACCACACGCGCAGCCCCACCGTGGCGCTCAAGTGCCTCTTCACGCTACACAACGTCGTCGTAAAGGGACCCTTCACGTTGAAGGACCAACTCTCATGTTACCCTTCCTACGGCGGCCACAACTTTCTTAACCTCTCAACCTTTCGCAACGACTCGGACGTGGAATCGGTGGAACTGAGTTCGTGGGTGCGATGGTACGCGGGCGTACTGGAACAGAGCCTCACGGTTTCCAGAGTCTTGGGGTATTACCTCAACGCTTATCGCGAATCCCAAGAAAGTAAAAAGATTATCCTTTCGAACGCGTCGAATGCGGATTTGTTGTACAAGGTGGAGGCGCTGCTGGGTTTCGTCGAACAAATAAGCCACGTGCCTGATTCACTGCACCTGCAGAGGAACGAGTTGGTGTACGAGGTTGTGCGGTTGGTGGGAGAGGATTATAGGAGCGTGCAGGTTGAGATTTTGTTGCGCGTGGAAGAACTTGTGGAGAGAATGGAGGATTTTGATGTGGGTGAGTTGAACGAGTTGGTGGGGTATTTAGGGAGATTGGAGGAGACTCAGGAGAAGTTGGTTCTTTTGTTCGTGAATAGGAAAAGGAACAGTGGATTCTGGGATTTGGTTCAGAAGACTAAGGTCAAGGGAATGGCCAAGAAGAGGGAGATTGAAGGGAAGTGGCTCACGGTGGTCGTCAACACCGGCGCCGCCGAATTGACTCGCTCCACGAACCCGTTTCTTGACCCGGTTCAACTGAGTCCGGTCCCACGGGTAGATTTTGCAACGGTAAGGTGA 1026 0.5507 MAQQKRLKTFTQNLKDKASVIAAVLSPKRHVSSVRVHVLRATTHALTAPPSEETIAAVLAVGQGSDRNPRACIDAIMDRLHHTRSPTVALKCLFTLHNVVVKGPFTLKDQLSCYPSYGGHNFLNLSTFRNDSDVESVELSSWVRWYAGVLEQSLTVSRVLGYYLNAYRESQESKKIILSNASNADLLYKVEALLGFVEQISHVPDSLHLQRNELVYEVVRLVGEDYRSVQVEILLRVEELVERMEDFDVGELNELVGYLGRLEETQEKLVLLFVNRKRNSGFWDLVQKTKVKGMAKKREIEGKWLTVVVNTGAAELTRSTNPFLDPVQLSPVPRVDFATVR 341
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01086 341 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Phco7g01086 341 PANTHER CLATHRIN ASSEMBLY PROTEIN 8 295 IPR045192 GO:0048268|GO:0072583
Phco7g01086 341 SMART enth_2 32 164 IPR013809 -
Phco7g01086 341 Pfam ANTH domain 35 225 IPR011417 GO:0005543
Phco7g01086 341 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Phco7g01086 341 CDD ANTH_N_AP180_plant 35 157 - -
Phco7g01086 341 SUPERFAMILY ENTH/VHS domain 34 161 IPR008942 -
Phco7g01086 341 Gene3D - 4 163 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01086 Phco-Chr7 9128631 9129656 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01086 7 9128631 9129656 Phco7g01086 7 9128631 9129656 ECH
Phco3g01251 3 11399186 11400226 Phco7g01086 7 9128631 9129656 PCT