Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01251 ATGTCCTTCCGCAAGACACTCACAAATCTCCTACACACTTTCAAAGACAAAGCCTCAGTGATCGCAGCATCACTCTCATTCAAGCGTCACGTGTCCACCGTTCGCGTCCATGTCCTGCGCGCCACCACTCACCGCCTCGCCGCTCCTCCGTCGGAGTCCCAAATCGCCGACGTTCTCTCCGCCGGCCGCGGCTCTTATCTCCTGCCACGCAACTGCATAGAGGCAATCATGGACCGCCTTCACAGAACCCAAAGCGCCACGGTGGCACTGAAATGCCTCTTCACTCTCCACAACATCGTATCCGAGGGACCCTTAACGCTAAAGGACAACCTCTCGCACTACCCTTCGCGCGGAGGACACAACGCTCTTAACCTCGCTACCTTCCGCGACGACACGGACGTGGAATCTCTGGAGCTCAGCTCGTGGGTTCGATGGTACGCGAATGTTCTGGAACATGTCTTGACGGTTTCGCGCGTTTTGGGTTATTATCTAAGAAACGACGGCGTCCGAAGAGAGTTTTCGGGGGTATCTAGCGTTGAGTTGCTGTGTGAAATACGAGGTTTAGTCGATTTCGTGGAGCAGGTGAGTAACGCGCCTGAGTCGCTGCACCTTCAGAGGATCGACTTGGTGTACAGAATTGTGAGATTGGTGTGCGATGATTACGGGCGTGCGCAGCGTGAGATTTCACTGCGCGTGGAGGAGACTGAGAGGAGGGTGGGGGATTTGGGTGTGGACGAGTTGAGAGAATTGGTGGGTTTTTTGAAGAGGTTGGAAGAGTGTAGGGAAAGGTTGGTGGTTTTGTTTGTGAATAGAAAGAAAAACGGTACGTTTTGGGATTTGATCGGTAAGGTTAAGAATAAGGGAGTAATGGTGATGGAAGATATGGAGTGGTTGACGGTGGTGGTGGTGAAGAGTATCAACGATTTGACTGAGTCGACTCGGTTCACCAACCCTTTTCTTGAGCCCGGCGAAATTTTATATTCCGGTCCCACCGGGTGGCGCGTGGCCACATGTCAGCTAACTGTTCCAACGTTGGGATGA 1041 0.5293 MSFRKTLTNLLHTFKDKASVIAASLSFKRHVSTVRVHVLRATTHRLAAPPSESQIADVLSAGRGSYLLPRNCIEAIMDRLHRTQSATVALKCLFTLHNIVSEGPLTLKDNLSHYPSRGGHNALNLATFRDDTDVESLELSSWVRWYANVLEHVLTVSRVLGYYLRNDGVRREFSGVSSVELLCEIRGLVDFVEQVSNAPESLHLQRIDLVYRIVRLVCDDYGRAQREISLRVEETERRVGDLGVDELRELVGFLKRLEECRERLVVLFVNRKKNGTFWDLIGKVKNKGVMVMEDMEWLTVVVVKSINDLTESTRFTNPFLEPGEILYSGPTGWRVATCQLTVPTLG 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01251 346 Pfam ANTH domain 35 158 IPR011417 GO:0005543
Phco3g01251 346 Gene3D - 5 163 IPR008942 -
Phco3g01251 346 FunFam Putative clathrin assembly protein At4g40080 6 163 - -
Phco3g01251 346 SMART enth_2 32 164 IPR013809 -
Phco3g01251 346 ProSiteProfiles ENTH domain profile. 26 164 IPR013809 -
Phco3g01251 346 PANTHER CLATHRIN ASSEMBLY PROTEIN 10 303 IPR045192 GO:0048268|GO:0072583
Phco3g01251 346 CDD ANTH_N_AP180_plant 35 157 - -
Phco3g01251 346 SUPERFAMILY ENTH/VHS domain 35 161 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01251 Phco-Chr3 11399186 11400226 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01251 3 11399186 11400226 Phco3g01251 3 11399186 11400226 ECH
Phco3g01251 3 11399186 11400226 Phco7g01086 7 9128631 9129656 PCT