Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01069 ATGGAGCCCGACGAGAAAAAAGCAATGATTCGCGATATTGCGCTACAAGTGGTTGTCATCTCCGTCGCCATCTTCTCCTTCCTCTGGATGCACGGCATTCCCCAGCGCCTCTATGCCAAGCTCCGCTACCGTCCCCCAAACCCACGCGCCGTCCAAGCCAAAGGCCACTTCGTCAAAGGCGCGCAACTCATCGCGCAAGCCAGAAGATCCAAAACCGCCTCCGTCACAACTTCACTCGCTAAACAGGCCCTAGCGGAAGCCGAGAAGGCCATCGAGCTTGATCCCAAGGACGCCGCCTCGCACTTCTTGAAGTCCATGGCGCTCGATCTCCAGGGCTTCCGTAGCAACGCGCTGGACGCGCTGGACGCCGCGCTGTCTCCACTGGCCGCGGCGTCGCTGGCGGCCGACGAGAGAGGCGACGCGCTGCTGAAGAGAGCGGAGCTGAAGATCGCGTTGAGCGAGCGACGCGCTGACTCGGTGCTGGCGGATTTGAACGAGTCGGTGAAGCTGAGTCCGCGAAACGCGAAAGCATGGTGCATGTTGGGAGAGTGTTGTGAGGGAAATGAGATGGGAGAGGAAGCGAAGAAGGCTTATAAAGAGGCTCTCGAATTGGAGCCGCAATTGAGTGTGGCTCAAGAAGCTCTCAAAAGGTTGGGTTCGTCGTAG 666 0.5901 MEPDEKKAMIRDIALQVVVISVAIFSFLWMHGIPQRLYAKLRYRPPNPRAVQAKGHFVKGAQLIAQARRSKTASVTTSLAKQALAEAEKAIELDPKDAASHFLKSMALDLQGFRSNALDALDAALSPLAAASLAADERGDALLKRAELKIALSERRADSVLADLNESVKLSPRNAKAWCMLGECCEGNEMGEEAKKAYKEALELEPQLSVAQEALKRLGSS 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01069 221 ProSiteProfiles TPR repeat profile. 175 208 IPR019734 GO:0005515
Phco7g01069 221 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 6 80 212 - -
Phco7g01069 221 Gene3D Tetratricopeptide repeat domain 41 132 IPR011990 GO:0005515
Phco7g01069 221 SMART tpr_5 175 208 IPR019734 GO:0005515
Phco7g01069 221 Gene3D Tetratricopeptide repeat domain 133 220 IPR011990 GO:0005515
Phco7g01069 221 SUPERFAMILY TPR-like 81 214 IPR011990 GO:0005515
Phco7g01069 221 Pfam Tetratricopeptide repeat 175 207 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01069 Phco-Chr7 8834986 8835651 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01069 7 8834986 8835651 Phco7g01069 7 8834986 8835651 ECH
Phco3g01204 3 10643538 10645869 Phco7g01069 7 8834986 8835651 PCT