Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01065 ATGGCTTCCAATTCCGATTTGGTGCGAACCGTTGAGTCGCTCCTTGGCGTTTCGCTCGGAGATTCCGTTTCGGATTCGCTGCTTCTCATCGCTACCACCTCCGCCGCGGTCGTAATCGGCCTTCTCGTGTTTTTATGGAAGAAATCTTCGGATCGGAGCAAGGAGGTGAAGCCGGTGATTGTGCCGAAGGGGTTACTGATGGAGGAGGAGGACGAAGTTGACGTTGGCGCAGGCAAGACTAAGGTCACCGTTTTCTTCGGCACTCAGACCGGTACTGCTGAAGGCTTTGCTAAGGCGTTGGCAGAGGAGATCAAGGCAAGGTATGAAAAAGCGGCTGTCAAAGTTATTGACCTGGATGACTATGCACCGGATGATGATCAATATGAGGAGAAGCTGAAGAAAGAGACTCTTGCATTTTTCATGCTGGCAACTTATGGAGATGGAGAACCAACAGACAATGCTGCAAGATTCTACAAATGGTTTACTGAGGGGAAAGATGAGAGGGGAACTTGGCTTCAAAAACTCGCATATGGTGTTTTTGGCCTAGGTAACAGACAATACGAACATTTTAATAAGATAGGTAAAGTTGTGGATGAAGGGCTTACTGAACAAGGTGCAAAGCGTCTAGTTACACTTGGATTAGGTGATGATGATCAATCCATTGAAGATGATTTTTCTGCCTGGAAAGAAAGTTTGTGGCCGGAGTTGGATCAGTTGCTCAGAGACGAGGATGATGCTAATACTGTCTCTACCCCCTATACAGCTGCTATTCTTGAATACCGAGTAGTGATTCATGACCCCACCACTGTAACATCAACCTATGATAATCACTCAACCATGGCAAATGGGAATGCTGTGTTTGATATTCATCATCCTTGCAGGGTGAATGTTGCTGTACAAAAGGAGCTTCACAAACCTGAGTCTGACCGTTCTTGCATACATTTGGAATTTGATATATCAGGGACGGGCATAATATATGAAACTGGAGACCATGTGGGTGTTTATGCTGAGAACTGCAATGAAACTGTTGAAGAAACTGGGAAGTTGTTGGGTCAGAATTTAGATCTATTGTTTTCTCTTCACACAGATAAGGATGATGGCACTTCCCTAGGTGGTTCTCTCCTACCTCCTTTCCCTGGCCCTTGCTCACTGCGAACTGCATTAGCACGATATGCTGATCTCTTGAACCCGCCACGAAAGGCTGCTTTAGTTGCATTAGCTGCTCATGCCTCTGAACCTAGCCAAGCAGAAAGATTAAAGTTCCTTTCATCTCCTCAGGGGAAGGATGAGTACTCCAAATGGGTGGTTGCAAGCCAGAGGAGTCTCCTTGAGGTGATGGCTGAGTTTCCATCAGCAAAACCTCCTCTTGGTGTGTTTTTTGCTGCAATAGCCCCTCGTTTACAGCCTCGTTATTATTCTATTTCATCCTCTCCTAGGTTTGCTCCTCAAAGGGTACATGTAACTTGTGCTTTGGTGTATGGTCCAACTCCCACTGGTAGAATTCACAGAGGTGTATGTTCAACTTGGATGAAGAATGCTATTCCCTTAGAAAAAAGTCACGACTGTAGCTGGGCTCCTATTTTTATTAGGCCATCAAATTTCAAGCTACCAGTTGATCATTCAATTCCTATTATTATGGTTGGACCTGGTACTGGTCTTGCACCTTTCAGGGGATTTTTACAGGAAAGATACGCTCTCATAGAGGATGGTGTTCAACTTGGCCCTGCATTGCTCTTCTTTGGATGTAGAAATCGTCAAATGGATTTCATTTATGAGGATGAGCTAAAGAATTTTGTGGAACAAGGTTCTCTTTCAGAATTGATAGTTGCATTCTCTAGAGAGGGGGCTGAAAAGGAATATGTTCAGCACAAGATGATGGACCAAGCTGCGCACCTGTGGAGTTTGATTTCTCAAGGAGGTTATCTTTACGTCTGTGGTGATGCCAAGGGTATGGCCAGAGATGTTCATCGAACTCTTCATTCCATTGTCCAGCAGCAGGAAAACGTGGACTCAACAAAAGCTGAAGCTATAGTGAAAAAACTCCAGATGGATGGACGTTACCTTAGAGATGTATGGTGA 2079 0.4493 MASNSDLVRTVESLLGVSLGDSVSDSLLLIATTSAAVVIGLLVFLWKKSSDRSKEVKPVIVPKGLLMEEEDEVDVGAGKTKVTVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVIDLDDYAPDDDQYEEKLKKETLAFFMLATYGDGEPTDNAARFYKWFTEGKDERGTWLQKLAYGVFGLGNRQYEHFNKIGKVVDEGLTEQGAKRLVTLGLGDDDQSIEDDFSAWKESLWPELDQLLRDEDDANTVSTPYTAAILEYRVVIHDPTTVTSTYDNHSTMANGNAVFDIHHPCRVNVAVQKELHKPESDRSCIHLEFDISGTGIIYETGDHVGVYAENCNETVEETGKLLGQNLDLLFSLHTDKDDGTSLGGSLLPPFPGPCSLRTALARYADLLNPPRKAALVALAAHASEPSQAERLKFLSSPQGKDEYSKWVVASQRSLLEVMAEFPSAKPPLGVFFAAIAPRLQPRYYSISSSPRFAPQRVHVTCALVYGPTPTGRIHRGVCSTWMKNAIPLEKSHDCSWAPIFIRPSNFKLPVDHSIPIIMVGPGTGLAPFRGFLQERYALIEDGVQLGPALLFFGCRNRQMDFIYEDELKNFVEQGSLSELIVAFSREGAEKEYVQHKMMDQAAHLWSLISQGGYLYVCGDAKGMARDVHRTLHSIVQQQENVDSTKAEAIVKKLQMDGRYLRDVW 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01065 692 Gene3D - 47 252 IPR029039 -
Phco7g01065 692 Pfam Flavodoxin 84 228 IPR008254 GO:0010181
Phco7g01065 692 PANTHER NITRIC OXIDE SYNTHASE-RELATED 76 692 - -
Phco7g01065 692 Pfam FAD binding domain 287 509 IPR003097 GO:0016491
Phco7g01065 692 FunFam NADPH--cytochrome P450 reductase 1 536 692 - -
Phco7g01065 692 Pfam Oxidoreductase NAD-binding domain 546 656 IPR001433 GO:0016491
Phco7g01065 692 SUPERFAMILY Riboflavin synthase domain-like 277 534 IPR017938 -
Phco7g01065 692 PRINTS Flavodoxin signature 174 184 IPR001094 GO:0010181
Phco7g01065 692 PRINTS Flavodoxin signature 83 96 IPR001094 GO:0010181
Phco7g01065 692 PRINTS Flavodoxin signature 139 150 IPR001094 GO:0010181
Phco7g01065 692 PRINTS Flavodoxin signature 198 217 IPR001094 GO:0010181
Phco7g01065 692 FunFam NADPH--cytochrome P450 reductase 63 252 - -
Phco7g01065 692 Gene3D - 336 468 IPR023173 GO:0016491
Phco7g01065 692 FunFam NADPH--cytochrome P450 reductase 336 468 - -
Phco7g01065 692 SUPERFAMILY Flavoproteins 78 241 IPR029039 -
Phco7g01065 692 Gene3D Translation factors 292 535 - -
Phco7g01065 692 ProSiteProfiles Flavodoxin-like domain profile. 82 233 IPR008254 GO:0010181
Phco7g01065 692 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 533 692 IPR039261 -
Phco7g01065 692 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 290 537 IPR017927 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 470 477 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 587 598 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 574 583 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 618 634 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 326 336 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 504 513 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 545 564 IPR001709 GO:0016491
Phco7g01065 692 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 641 649 IPR001709 GO:0016491
Phco7g01065 692 Gene3D - 536 692 IPR039261 -
Phco7g01065 692 CDD CYPOR 288 692 - -
Phco7g01065 692 PIRSF P450R 20 692 IPR023208 GO:0003958
Phco7g01065 692 Hamap NADPH--cytochrome P450 reductase [POR]. 22 692 IPR023208 GO:0003958
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01065 Phco-Chr7 8799861 8807476 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01065 7 8799861 8807476 Phco7g01065 7 8799861 8807476 ECH
Phco3g01211 3 10717409 10728743 Phco7g01065 7 8799861 8807476 PCT