Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01211 ATGGCTTCGAATTACGAGCTGGTGCGCACCGTTTTGGGCGTTTCGGTTTCGGATTCGGTACTGCTGATTGTCACCACCTCCGCCGCCGTGCTGATTGGCCTTCTGGTGTTCGTATGGAAGAAATCTTCGGATCGGAGCAAGGAACAGAAGTCGCTCGCAGTGCCGAAGTTGGCTCTGCGGGAAGAAGAGGAAGATGAAGCCGATGTTGGTTTGGGGAAGACCAGGGTTGTGGTTTTCTTTGGAACTCAAACCGGCACCGCTGAGGGATTTGCCAAGGCTTTGGCTGAGGAGATCAAGGCTAGGTATGAGAAAGCAGCTGTGAAAGTTGTTGACCTGGATGACTATGCAATGGATGATGATCAATATGAAGAGAAGCTGAAGAAAGAGTCACTTGCATTTTTCATGTTGGCAACATATGGAGATGGAGAGCCAACTGACAATGCTGCAAGATTCTGCAAATGGTTTAGTGAGGGTAAAGATGAGAGGGGTACCTGGCTTCAACAACTCAAATATGGTGTTTTTGGCTTAGGTAACCGGCAATATGAACATTTTAACAAGATAGGTGAAATAGTTGATCAAGAACTTAGTGAACAAGGTGCAAAGCGTCTTGTTCCACTAGGGCTAGGAGATGATGATCAATCCATTGAGGATGATTTTGTTGCTTGGAAGGAATCTCTATGGCCTGAGTTGGATGAGTTGCTCCGAGATGAGGATGATGTAAATACTGTCTCTACTCCTTATAAGGCTGCTATTCCTGAATATCGAGTGGTTATTCTTGATTCAACTGTCACATCTTTCAATGATAATTGCATAAATGTGGCAAATGGGAATACTGTATTTGATATTCACCATCCTTGCAGGGTTAATGTTGCAGTTCAAAGAGAACTTCACAAACCTGACTCTGACCGATCTTGCATACATTTGGAGTTTGACATATCAGGGACTGGCATAATATATGAAACTGGTGACCATGTGGGTGTTTTTGCTGAAAACTGTGATGAAACTGTTGAAGAAGCTGGAAAGTTGCTGGGTCAGAATTTAGATCTGTTGTTTTCCCTTCACACTGATAATGAGGATGGTAGTCCCTTGGGAGGATCTCTACCACCTCCTTTTCCTGGCCCTTGCACACTGCGCTATGCTTTAGCTCATCATGCAGATCTCTTGAACCCCCCACGCAAGGCTGCTTTAGTGGCTCTGGCTGCACACACTTCGGAACCCAGTGAAGCAGATAGATTAAATTTCCTCTCATCTCCTCAGGGAAAGGATGAGTACTCCAAATGGGTGGTTGGAAGTCAGAGAAGTCTCCTTGAGGTTATGGCCGAGTTCCCATCAGCCAAGCCACCCCTTGGTGTTTTTTTCGCTGCAGTAGCCCCTCACTTACAACCTCGTTATTATTCTATTTCATCCTCACCTAGGTTTTCCCCTCAGAGGGTACATGTAACTTGTGCATTGGTATGTGGTCCAACTCCTACTGGAAGAATTCACAAAGGAGTATGTTCAACCTGGATGAAGAGTGCTATTCCCTTGGAGAAAAGTCATGAGTGTAGTTGGGCTCCTATTTTTATCAGAACATCAAACTTCAAGTTACCGGCCGATCATTCCATTCCTATTATTATGGTTGGTCCTGGAACTGGCTTTGCACCTTTCAGGGGATTTTTACAGGAAAGGTCGGATCTCAAAGAGAATGGTATTCAACTTGGATCGGCATTACTCTTCTTTGGATGTAGGAACCGTCAAATGGATTTTATTTATGAGGATGAGCTAAACAAATTTGTGGAACAAGGTGCTCTGTCAGAGTTGATAGTCGCGTTCTCTAGAGAGGGACCTGAAAAGGAGTATGTTCAACACAAGATGATTGATAAAGCAGCAAATTTGTGGAATTTGATTTCCCAGGGAGGTTATCTTTATGTCTGTGGCGATGCTAAGGGTATGGCAAGAGATGTTCATCGGACTCTTCATACCATTGTCCAGCAGCAGGAAAAAGTGGACTCTTCAAAAGCAGAGGCTATTGTGAAAAAACTCCAGATGGATGGACGTTATCTTAGAGATGTTTGGTAA 2058 0.4436 MASNYELVRTVLGVSVSDSVLLIVTTSAAVLIGLLVFVWKKSSDRSKEQKSLAVPKLALREEEEDEADVGLGKTRVVVFFGTQTGTAEGFAKALAEEIKARYEKAAVKVVDLDDYAMDDDQYEEKLKKESLAFFMLATYGDGEPTDNAARFCKWFSEGKDERGTWLQQLKYGVFGLGNRQYEHFNKIGEIVDQELSEQGAKRLVPLGLGDDDQSIEDDFVAWKESLWPELDELLRDEDDVNTVSTPYKAAIPEYRVVILDSTVTSFNDNCINVANGNTVFDIHHPCRVNVAVQRELHKPDSDRSCIHLEFDISGTGIIYETGDHVGVFAENCDETVEEAGKLLGQNLDLLFSLHTDNEDGSPLGGSLPPPFPGPCTLRYALAHHADLLNPPRKAALVALAAHTSEPSEADRLNFLSSPQGKDEYSKWVVGSQRSLLEVMAEFPSAKPPLGVFFAAVAPHLQPRYYSISSSPRFSPQRVHVTCALVCGPTPTGRIHKGVCSTWMKSAIPLEKSHECSWAPIFIRTSNFKLPADHSIPIIMVGPGTGFAPFRGFLQERSDLKENGIQLGSALLFFGCRNRQMDFIYEDELNKFVEQGALSELIVAFSREGPEKEYVQHKMIDKAANLWNLISQGGYLYVCGDAKGMARDVHRTLHTIVQQQEKVDSSKAEAIVKKLQMDGRYLRDVW 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01211 685 Gene3D - 529 685 IPR039261 -
Phco3g01211 685 SUPERFAMILY Flavoproteins 72 235 IPR029039 -
Phco3g01211 685 ProSiteProfiles Flavodoxin-like domain profile. 76 227 IPR008254 GO:0010181
Phco3g01211 685 FunFam NADPH--cytochrome P450 reductase 329 461 - -
Phco3g01211 685 Pfam FAD binding domain 280 502 IPR003097 GO:0016491
Phco3g01211 685 PRINTS Flavodoxin signature 168 178 IPR001094 GO:0010181
Phco3g01211 685 PRINTS Flavodoxin signature 133 144 IPR001094 GO:0010181
Phco3g01211 685 PRINTS Flavodoxin signature 77 90 IPR001094 GO:0010181
Phco3g01211 685 PRINTS Flavodoxin signature 192 211 IPR001094 GO:0010181
Phco3g01211 685 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 283 530 IPR017927 GO:0016491
Phco3g01211 685 Pfam Flavodoxin 78 222 IPR008254 GO:0010181
Phco3g01211 685 SUPERFAMILY Riboflavin synthase domain-like 275 527 IPR017938 -
Phco3g01211 685 FunFam NADPH--cytochrome P450 reductase 1 529 685 - -
Phco3g01211 685 Gene3D - 39 245 IPR029039 -
Phco3g01211 685 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 526 685 IPR039261 -
Phco3g01211 685 Pfam Oxidoreductase NAD-binding domain 539 649 IPR001433 GO:0016491
Phco3g01211 685 FunFam NADPH--cytochrome P450 reductase 56 246 - -
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 567 576 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 580 591 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 319 329 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 463 470 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 497 506 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 538 557 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 634 642 IPR001709 GO:0016491
Phco3g01211 685 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 611 627 IPR001709 GO:0016491
Phco3g01211 685 Gene3D Translation factors 285 528 - -
Phco3g01211 685 PANTHER NITRIC OXIDE SYNTHASE-RELATED 71 685 - -
Phco3g01211 685 Hamap NADPH--cytochrome P450 reductase [POR]. 15 685 IPR023208 GO:0003958
Phco3g01211 685 CDD CYPOR 281 685 - -
Phco3g01211 685 PIRSF P450R 7 685 IPR023208 GO:0003958
Phco3g01211 685 Gene3D - 329 461 IPR023173 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01211 Phco-Chr3 10717409 10728743 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01211 3 10717409 10728743 Phco3g01211 3 10717409 10728743 ECH
Phco3g01211 3 10717409 10728743 Phco7g01065 7 8799861 8807476 PCT