Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g01054 ATGAACACAAACAGAGCCGAAGCCGAACGCTTGCTGGCCATCGGCGAGAAGCTGCTGCAGAGCCGCGACCTGAGCGGCTCCCGCGACTTCGCCATTCTCGCGCAGGAAGCTGAGCCGCTCCTCGACGGCTCTGACCAGATCCTCGCCATCGTCGACGTCGTCGTCGCCGCCGAGAAGCCGATCCACAACAACCACCTCGATTGGTACGCCATTCTCCAAGTGGATCGCACGTGCCAGGACCTTGATCTCATAAAAAAACAGTACCGCAGACTCGGACTTCTCCTTCATCCTGACAAGAACCCTTTTTCCCTCGCCGACCACGCTTTCAAGCTTGTCACCGATGCCTGGGCCGTTTTATCCGACCCGGTTCAGAAATCCCTGTACGACCGAGACGTTGCCGGTTCGGTCGAAACTGCGAGTTTCTGGACCGCGTGCCCCTACTGTTATTTTCTCTTCGAGTACCCTGTGAATTGCGAGGGGCGTTGCCTGAGGTGCCAGAATTGCGAGAGGACATTCCACGGGCTTTCGATTCCATCGCTCCCCCCGCTCGTGCCGGGCCAGGAGGCCTATTATTGTAACTGGGGGTGCTTGCCCATGGGCTTTGTGTTTGGAACTTCGGGCTCCAATGGGCCTGGGTCTGTGCCTGAGCTCGTGGTTGAGAATGGCCCGAAGGCTGCTTCGAATGGGACTGCTTCGGAATTGGGTTCCCGTTCTGCGCGGAAGCGGGGAAGGCCTCGAAAGGGGGTTTCAATTTTGGAAGGTAGAGTTTCGGGTTCAATATTTTCCATCCATTTCGAATCTGCATTTATTGACCTTGGCGAATGCTTCTTGTTCGATGAAATGAAATCACAATCTACATTATTATATCTCCCCTCATTATCAGGTAAAGAGGAGGATAGGGCTAGAGGTATTCTGCAGAGAGTTTATGGGCTAGATTAG 939 0.5453 MNTNRAEAERLLAIGEKLLQSRDLSGSRDFAILAQEAEPLLDGSDQILAIVDVVVAAEKPIHNNHLDWYAILQVDRTCQDLDLIKKQYRRLGLLLHPDKNPFSLADHAFKLVTDAWAVLSDPVQKSLYDRDVAGSVETASFWTACPYCYFLFEYPVNCEGRCLRCQNCERTFHGLSIPSLPPLVPGQEAYYCNWGCLPMGFVFGTSGSNGPGSVPELVVENGPKAASNGTASELGSRSARKRGRPRKGVSILEGRVSGSIFSIHFESAFIDLGECFLFDEMKSQSTLLYLPSLSGKEEDRARGILQRVYGLD 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g01054 312 ProSitePatterns Nt-dnaJ domain signature. 109 128 IPR018253 -
Phco7g01054 312 Gene3D DnaJ domain 54 144 IPR036869 -
Phco7g01054 312 SMART dnaj_3 66 124 IPR001623 -
Phco7g01054 312 MobiDBLite consensus disorder prediction 214 246 - -
Phco7g01054 312 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 210 - -
Phco7g01054 312 PRINTS DnaJ domain signature 88 103 IPR001623 -
Phco7g01054 312 PRINTS DnaJ domain signature 104 124 IPR001623 -
Phco7g01054 312 PRINTS DnaJ domain signature 69 87 IPR001623 -
Phco7g01054 312 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Phco7g01054 312 SUPERFAMILY Chaperone J-domain 61 131 IPR036869 -
Phco7g01054 312 CDD DnaJ 67 121 IPR001623 -
Phco7g01054 312 Pfam DnaJ domain 67 129 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g01054 Phco-Chr7 8711919 8714027 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g01054 7 8711919 8714027 Phco7g01054 7 8711919 8714027 ECH
Phco3g01216 3 10791766 10792773 Phco7g01054 7 8711919 8714027 PCT