Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco3g01216 ATGCACAACGCAACACGCACCGAAGCGGAGCGTCTCCTCGGGATCGCCGAGAAGCTTCTCCAGTCCCGTGATTTGATGGGTTCGCGCGAGTTCGCGATCCTCGCGCAGGAAACTGAGCCTCTTCTCGAAGGTTCCGACCAGATCCTCGCCATCGTCGACGTGCTCCTCGCCGCCGATAAACGAGTCAACAACCACCCGGACTGGTACGCCGTCCTCCAGGTCGATCGGCGCTCCGACGACCTTGACCTTATAAAGAAACAGTACCGCCGCCTTGCGCTCCTCCTCCACCCCGACAAGTCTCGCTACCCCTTCGCCGACCACGCCTTCAAGCTCGTCGCCGACGCGTGGGCCTTATTCGCCGATCCCGTGAAGAAGTCCGTGTACGATAAAGAGCTCTCGTTCTTCTCGCGCGTCGATTTGTCCGTTCCCGGATGGGTCCCGCAGGAAAAGCTCTCAGTCCGCAGGCCTGGGGCTGGGCCTGAACCCGGAACAAGCACACGCAACAGTGCCTCGGCCCGCGACCAGATTCACGCTGATGAAAGTTCCCGAAGGAGAAACTCAACTTTCTGGACCGCGTGTCCCTACTGTTACCGTTTGTATGAATACCCTAGGGTTTACGAGGGTAATTGTCTACGGTGCCAGAATTGCGATAGATCCTTCCACGGTGTGGCGGTTCCGTCGCTGCCGCCGCTGGTCCCCGGCCAGGACGCGTATTATTGCTGCTGGGGCTTCTTCCCCATGGGATTTGTAACGGGTAACTTCGGTTCATCGGAGAAAGAGGCGGCAGCAGTGCCTGCACCGCAGCCCCCTCCTCCTCCGCCTCCTCCTCCGGCTCAACCGGCTTCTTCTCTGCCGAATTGGATGCCCGTGCCGGCGGAGAATGGTGAACAGGCGACGCCGGTGGCGGCAAGGGTGACTCGGTCGGCGGCGACGGTGGCCGCTAGAGCGACGAACGGGAGTGGGCCGAAGAAGAGGGGGAGGCCGAGGAAGTATCCGTTGCCGTCGTGA 1008 0.6131 MHNATRTEAERLLGIAEKLLQSRDLMGSREFAILAQETEPLLEGSDQILAIVDVLLAADKRVNNHPDWYAVLQVDRRSDDLDLIKKQYRRLALLLHPDKSRYPFADHAFKLVADAWALFADPVKKSVYDKELSFFSRVDLSVPGWVPQEKLSVRRPGAGPEPGTSTRNSASARDQIHADESSRRRNSTFWTACPYCYRLYEYPRVYEGNCLRCQNCDRSFHGVAVPSLPPLVPGQDAYYCCWGFFPMGFVTGNFGSSEKEAAAVPAPQPPPPPPPPPAQPASSLPNWMPVPAENGEQATPVAARVTRSAATVAARATNGSGPKKRGRPRKYPLPS 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco3g01216 335 SUPERFAMILY Chaperone J-domain 59 132 IPR036869 -
Phco3g01216 335 SMART dnaj_3 66 124 IPR001623 -
Phco3g01216 335 MobiDBLite consensus disorder prediction 264 284 - -
Phco3g01216 335 Pfam DnaJ domain 67 129 IPR001623 -
Phco3g01216 335 MobiDBLite consensus disorder prediction 151 180 - -
Phco3g01216 335 PRINTS DnaJ domain signature 69 87 IPR001623 -
Phco3g01216 335 PRINTS DnaJ domain signature 88 103 IPR001623 -
Phco3g01216 335 PRINTS DnaJ domain signature 104 124 IPR001623 -
Phco3g01216 335 Gene3D DnaJ domain 56 139 IPR036869 -
Phco3g01216 335 ProSiteProfiles dnaJ domain profile. 67 132 IPR001623 -
Phco3g01216 335 MobiDBLite consensus disorder prediction 260 335 - -
Phco3g01216 335 CDD DnaJ 67 116 IPR001623 -
Phco3g01216 335 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 1 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco3g01216 Phco-Chr3 10791766 10792773 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco3g01216 3 10791766 10792773 Phco3g01216 3 10791766 10792773 ECH
Phco3g01216 3 10791766 10792773 Phco7g01054 7 8711919 8714027 PCT