Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00934 ATGAGAGTTTCAGCGGAGAAGCCGACGCCGTCGGAGACCGAGGCGAGCCCTGAGACCAAGAAGATAAAGCGCATTCGTGACTCGAGCAAGCACCCGGTGTACCGCGGCGTGCGGATGCGGAACTGGGGGAAGTGGGTGTCGGAAATCCGCGAGCCGCGGAAGAAGTCGCGGATATGGCTAGGCACATTCCCGACGCCGGAGATGGCGGCGAGGGCGCACGACGTGGCCGCTCTCAGCATCAAAGGCTCCGCCGCCATTCTGAACTTCCCCCACCTGGCAAACTCCCTCCCACGCCCGGCCTCCCTGGCGGCCCGCGACGTCCAGGCGGCGGCGGCGAAGGCGGCGCACATGGAGCCGTCCTCCCTCTCGTCCTTGGTGTCGGCAATGGACCTGTCCTCTGCCTCGGACGAGTTGACTGAGATAGTTGAACTTCCGTCCCTGGAAAGCACTGATGATGGGTGTGTGGAGTTGGAGAAGGAGTTTGTTTTCGTGGACTCGGTGGACACGTGGATGTATCAGCCAGCAGCCTTTGATTTTGACGCCGAACGAGACATTGTCTTTGAGGGTCTGGTGTGGAATTACTAG 585 0.6137 MRVSAEKPTPSETEASPETKKIKRIRDSSKHPVYRGVRMRNWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDVAALSIKGSAAILNFPHLANSLPRPASLAARDVQAAAAKAAHMEPSSLSSLVSAMDLSSASDELTEIVELPSLESTDDGCVELEKEFVFVDSVDTWMYQPAAFDFDAERDIVFEGLVWNY 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00934 194 CDD AP2 34 92 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 14 151 - -
Phco7g00934 194 PRINTS Ethylene responsive element binding protein signature 56 72 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 PRINTS Ethylene responsive element binding protein signature 34 45 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 ProSiteProfiles AP2/ERF domain profile. 33 90 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 MobiDBLite consensus disorder prediction 13 29 - -
Phco7g00934 194 Pfam AP2 domain 32 82 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 SMART rav1_2 33 96 IPR001471 GO:0003700|GO:0006355
Phco7g00934 194 SUPERFAMILY DNA-binding domain 33 91 IPR016177 GO:0003677
Phco7g00934 194 MobiDBLite consensus disorder prediction 1 29 - -
Phco7g00934 194 Gene3D AP2/ERF domain 33 91 IPR036955 GO:0003700|GO:0006355
Phco7g00934 194 FunFam Ethylene-responsive transcription factor 2 32 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00934 Phco-Chr7 7501760 7502344 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Phco7g00934 AP2 1.9e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00934 7 7501760 7502344 Phco7g00934 7 7501760 7502344 ECH
Phco7g00934 7 7501760 7502344 Phco2g00834 2 9680320 9681027 PCT