Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00829 ATGTTTCTCTCCAATTCAGATTCCTCCTTCGTTGATCCGATTCTGCAAATACATCGATCAATTCGGATGGCGAATGATAAAGTGATTGATGAAGGCGAGAAGAAAGAGAACGGTGGTACGAGCCCCTCCGGAGGTGGGAAGAAGAAGCGCAGAGGCTTTTTATCGCGAATTTGGAACGGGATATTTAGGTTGCACGGTGATGATTTTGAGAAAAGACTCCAATACATTTCTAAAGAGGAGGCTCAGGTTATGACTAGGATAACCGAGAGATCACGATCCTGGAGGAGAATTTCCCGCCATCTTATCGTGTTTTCTGTCATATTTGAGGTTGTTGCTGTAGTTTATGCTGTTATGACAACAAGATCAATTGATATGGATTGGAAAATGAGGGCAATCCGTGTTTTGCCAATGTTTCTTTTGCCTGCACTGGCATCTGCTGCCTATACAGCATTTATAAGCTTCACAAGGATGTGTGATCGCAGGGACCAGAAAATTCTTGAAAGGCTTCGAGCTGAAAGGCAAGAAAAAATTGATGAGCTCAAAGAAAAGACAAATTACTACACTACACAACAGCTCATTCAGAGATATGATCCAGACCCAGCTGCAAAAGCAGCTGCTGCAACTGTTTTAGCATCTAAGTTGGGTGCAGATTCTGGTTTGAGAGTGTATCTGGAAGATGAACCCAATTCCCGTGCTCCAATAGGAAAGAGCAATGATGTTGAACTTATGCAGTCCTCTGGACTTCGAAATCGGAGGCAAGTTCAATCTAGATGCACTAGTCCAAGGGCAGGCACACCAAATCCTGGTGATGAACAAGTTGGTCTTGGGGGAAGTTATCAAACTCAGACTTTTGACGACAATCAGCCTGTTGTTGTTGAACACCACCAACCTCAAAGTTCAAACACACAAGATGGTGGATGGATTGCACGAATTGCAGCTTTGCTTGTGGGTGAGGATCCAGCACAGTCTTATGCTCTCGTATGTGGTAACTGCTATATGCATAATGGTCTAGCTCGGAAGGAGGATTTCCCATTTATCACATACTACTGCCCACACTGTCATGCCCTTAACAAACCGAAGCAATTGGATGAGCGTATCTCTAGTCTTACATCTCCAAACACGGGGACTCCAAAAACAGACAATAGTGCCACTGATGCATTTAAGAATATTAGGGCTTCTGCAGCCGAGAGTATAATCACAGGCAGTAGTCCTGGAAGTGCTTCTAGCTCTGAGATTGGGGAAGTAACAGAAAGGGCTAGTATGGATGAGAAAGATGATTAA 1281 0.4387 MFLSNSDSSFVDPILQIHRSIRMANDKVIDEGEKKENGGTSPSGGGKKKRRGFLSRIWNGIFRLHGDDFEKRLQYISKEEAQVMTRITERSRSWRRISRHLIVFSVIFEVVAVVYAVMTTRSIDMDWKMRAIRVLPMFLLPALASAAYTAFISFTRMCDRRDQKILERLRAERQEKIDELKEKTNYYTTQQLIQRYDPDPAAKAAAATVLASKLGADSGLRVYLEDEPNSRAPIGKSNDVELMQSSGLRNRRQVQSRCTSPRAGTPNPGDEQVGLGGSYQTQTFDDNQPVVVEHHQPQSSNTQDGGWIARIAALLVGEDPAQSYALVCGNCYMHNGLARKEDFPFITYYCPHCHALNKPKQLDERISSLTSPNTGTPKTDNSATDAFKNIRASAAESIITGSSPGSASSSEIGEVTERASMDEKDD 426
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00829 426 Coils Coil 163 186 - -
Phco7g00829 426 MobiDBLite consensus disorder prediction 28 50 - -
Phco7g00829 426 MobiDBLite consensus disorder prediction 398 415 - -
Phco7g00829 426 MobiDBLite consensus disorder prediction 398 426 - -
Phco7g00829 426 MobiDBLite consensus disorder prediction 366 386 - -
Phco7g00829 426 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 307 357 IPR019273 -
Phco7g00829 426 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 47 423 IPR040115 GO:0071786
Phco7g00829 426 MobiDBLite consensus disorder prediction 247 266 - -
Phco7g00829 426 MobiDBLite consensus disorder prediction 247 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00829 Phco-Chr7 6537821 6541163 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00672 2 6743033 6747333 Phco7g00829 7 6537821 6541163 PCT