Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00672 ATGGGGGATGAGAAAGGTGAGACCAAAGAAACTGGTGCTGTGAAGGAGAATATCGAGGACAATGCGGAGAACACCAAGAAACAGAAGAAGAAGGGCTTTGTTTCGCGATTATGGAACGCCTTGTTCAGCTCCAACAAAGACGATTTCGAGAAGAGGCTTCAGTATATCACCAAAGAAGAAAATACTGTCGTTGCGAGAATGAGCAACAGATCTCGCTCTTGGAGGCGAACCTCTCGCCAGCTTATTTTATTTTCCTTTCTGTTCGAGGTCATTGCTGTAGGTTATGCTATTATGACAACAAGATCAATTGATATGAATTGGAAAATGCGGGCAATCCGAGTTTTGCCAATGTTTCTTTTGCCTGCCTTGTCAGCTGCTACATATTCAACATTTGTCAGTTTCACAAGGATGTGTGATCGCAAGGACCAGAAAATTCTTGATAGGCTTAGAGCTGAAAGGAAAGCAAAAATTGATGAGCTCAAAGAGAAGACAAATTATTACATTACTCAACAACTCATTCAGAGATATGACACGGATCCAGCAGCAAAAGCAGCCGCTGCAACTGTTTTAGCATCTAAGTTGGGTTCAGATTCTGGTTTGAATGTGTATGTGGAGAATGAATCTTCTGGTGCTCCAACTGGGAAGACCAAGGATGTTGAAGTTGTACAGTCAACGGGACTACGAAATCGGAAGCAAGTGAACTCTAGATCCACTAGTCCAGGGACAAATACAACAAATTATTCTGATCAACAATTAGTTGGTTCTGGGAAAATTAATCAAACTCAAATTCCTGAGCATAATGAGCTTGTAGTTGTTGAACATCTTCCTCAAAGTTCAGCGATGAATGATGGAGGGTGGATTGCTCGAATTGCAGCATTGCTTGTGGGCGAGGATCCCACGCAGTCTTATGCACTCATATGTGGTAATTGTCGTATGCACAATGGTCTTTCTCGGAAGGAGGATTTCCCATTCATTACCTATTACTGCCCACATTGTCACGCCTTGAACAAACCAAAGGTATCGGATGAACATATATCTTTCCCAAACACCACTAGTTCTCCAAAAGCACGTGATGGCGAAGAAGTCCAAAAAGCTGATGCTTCTGACAGCTTAATCGTAAGCGACAATCCTGTAAAAGCTACCCCTGAGATTGAGGAAGTATCTGACCGGGCTGCTTCAGGGGAAGAAAGCTAG 1194 0.4288 MGDEKGETKETGAVKENIEDNAENTKKQKKKGFVSRLWNALFSSNKDDFEKRLQYITKEENTVVARMSNRSRSWRRTSRQLILFSFLFEVIAVGYAIMTTRSIDMNWKMRAIRVLPMFLLPALSAATYSTFVSFTRMCDRKDQKILDRLRAERKAKIDELKEKTNYYITQQLIQRYDTDPAAKAAAATVLASKLGSDSGLNVYVENESSGAPTGKTKDVEVVQSTGLRNRKQVNSRSTSPGTNTTNYSDQQLVGSGKINQTQIPEHNELVVVEHLPQSSAMNDGGWIARIAALLVGEDPTQSYALICGNCRMHNGLSRKEDFPFITYYCPHCHALNKPKVSDEHISFPNTTSSPKARDGEEVQKADASDSLIVSDNPVKATPEIEEVSDRAASGEES 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00672 397 MobiDBLite consensus disorder prediction 345 397 - -
Phco2g00672 397 Pfam Predicted integral membrane zinc-ribbon metal-binding protein 286 336 IPR019273 -
Phco2g00672 397 PANTHER ENDOPLASMIC RETICULUM JUNCTION FORMATION PROTEIN LUNAPARK 27 376 IPR040115 GO:0071786
Phco2g00672 397 Coils Coil 146 166 - -
Phco2g00672 397 MobiDBLite consensus disorder prediction 226 250 - -
Phco2g00672 397 MobiDBLite consensus disorder prediction 1 30 - -
Phco2g00672 397 MobiDBLite consensus disorder prediction 382 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00672 Phco-Chr2 6743033 6747333 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00672 2 6743033 6747333 Phco7g00829 7 6537821 6541163 PCT