Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00802 ATGGATAAAGTAAATAAGATGTGTGCCAAAGATGAAGAACGTCCAATCCGAGTCACCAGAGCAAAGACTAGAGCCTTGAGAGGAATTCCTCCCCGTTCAAGACCTTCCTCTAAAAATGAACAGAAAAACATGTCTCGAGCAAATTCCAAAAGAGCAGCCACTTCTGAAGACCAAACTTTTGTGGTTGTTCCTGCTCTTGTTCAAAATAAGAGAAGGGCAGTTCTTACAGATGTAACAAATATTTGCGCAAAATCACATGATAAGTGTACTGAGGCATCAAAGTTTACGGCCAAAGGAGTTTATACAAAGAAAAGCACAAAACTAGCTTCAGGTGTTTCCTCTGAAGTCTCATCAACGCAAGAGAATGTTGGAGCAAAGTTAGCTGAAGATTTATCAACAATAAGGATGGTAGAATCCATTGACACCATAAGTGAACGTGTTATACCAGGCACCAAGCCGTCAATGCAAGATTCTGTGGAATCTGATGAACTCCTTAGCTCTTCAAAAAATGATGTAGATGTGATTTCTGAGAAGCCAAGAACCTCAAACTCCCTTGCTATAGTGGACATTGATTCAGAGTTAAAGGATCCTCAAATTTGGAGTTCTTATGCCTCTGACATGTACAATAACATTCGAGTAACAGAGCTTAAAAGGGAAACATTGACTAACTACATGGAGAAGTTGCAGACAGATATTAATCCAAGCATGCGTGGCATTCTGGTAGATTGGCTTGTGGAGGTTTCCGAGGAATACAGATTGGTTCCAGACGCTCTTTACCTGACAGTGAACCTCATTGATCGGTATCTCTCAACTAAATTCATTCAGAAGCAAAGGCTACAGTTGCTGGGTGTTACTAGCATGCTGATTGCATCAAAGTACGAAGAGATGTGCCCACCTCGAGTGGAAGAATTTTGCTTCATCACAGATAACACATACACAAAAGAAGAGGTACTGAGAATGGAGAGAGAAATACTGAATGTGATGCATTTTCAGCTATCTGTTCCCACAATCAAAACATTTCTGAGGAGATTCATCCAAGCAGCACAATCTTCTTACAAGGCTCCTTGTGTTGAACTGGAATTCTTGGCAAATTATTTAGCTGAGCTTGCTCTTGTAGAATATAGCTTCTTCCAGTTTCTTCCTTCTCTTGTAGCTGCATCTGCTGTGTTCCTTGCCAGATGGACCCTGAACGATTCAGAACATCCATGGAATCCAACTTTGGAGCACTATGCAAACTACAAAGCTTCAGAGCTCAAAACTGTTGTTCTTGCACTGCAAGATCTGCAACTTAATTCCAAAGGCTGTCCCCTCAATGCTGTCCGTGATAAGTATAAACAACAGAAGTTCAATTGTGTGGCAAACTTGTCTCCAAAACCGGTACAGTCACTCTTCCAGGCCCAAGTTGCCAGATTTCCTTGTAAAACGAAATTGCTGCGGGATGATACAGTTCAAAGAGTGAGTTGA 1464 0.4126 MDKVNKMCAKDEERPIRVTRAKTRALRGIPPRSRPSSKNEQKNMSRANSKRAATSEDQTFVVVPALVQNKRRAVLTDVTNICAKSHDKCTEASKFTAKGVYTKKSTKLASGVSSEVSSTQENVGAKLAEDLSTIRMVESIDTISERVIPGTKPSMQDSVESDELLSSSKNDVDVISEKPRTSNSLAIVDIDSELKDPQIWSSYASDMYNNIRVTELKRETLTNYMEKLQTDINPSMRGILVDWLVEVSEEYRLVPDALYLTVNLIDRYLSTKFIQKQRLQLLGVTSMLIASKYEEMCPPRVEEFCFITDNTYTKEEVLRMEREILNVMHFQLSVPTIKTFLRRFIQAAQSSYKAPCVELEFLANYLAELALVEYSFFQFLPSLVAASAVFLARWTLNDSEHPWNPTLEHYANYKASELKTVVLALQDLQLNSKGCPLNAVRDKYKQQKFNCVANLSPKPVQSLFQAQVARFPCKTKLLRDDTVQRVS 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00802 487 Gene3D - 220 333 - -
Phco7g00802 487 Pfam Cyclin, C-terminal domain 335 457 IPR004367 -
Phco7g00802 487 MobiDBLite consensus disorder prediction 1 20 - -
Phco7g00802 487 SUPERFAMILY Cyclin-like 195 332 IPR036915 -
Phco7g00802 487 Pfam Cyclin, N-terminal domain 206 333 IPR006671 -
Phco7g00802 487 MobiDBLite consensus disorder prediction 34 55 - -
Phco7g00802 487 SMART cyclin_7 242 326 IPR013763 -
Phco7g00802 487 SMART cyclin_7 339 427 IPR013763 -
Phco7g00802 487 PIRSF Cyclin_A_B_D_E 6 469 IPR046965 GO:0016538|GO:0044772
Phco7g00802 487 SUPERFAMILY Cyclin-like 334 457 IPR036915 -
Phco7g00802 487 Gene3D - 206 454 - -
Phco7g00802 487 ProSitePatterns Cyclins signature. 237 268 IPR006671 -
Phco7g00802 487 FunFam Mitotic cyclin 6 220 320 - -
Phco7g00802 487 FunFam Cyclin A1 322 454 - -
Phco7g00802 487 MobiDBLite consensus disorder prediction 1 55 - -
Phco7g00802 487 CDD CYCLIN_AtCycA-like_rpt2 335 449 - -
Phco7g00802 487 SMART Cyclin_C_2 335 458 IPR004367 -
Phco7g00802 487 PANTHER CYCLINS 162 450 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00802 Phco-Chr7 6271341 6276182 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00802 7 6271341 6276182 Phco7g00802 7 6271341 6276182 ECH
Phco2g00639 2 6395516 6401272 Phco7g00802 7 6271341 6276182 PCT