Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00639 ATGGATAGAGAGAATGCTGTAATCGGTGGTGGTGTGAGAGACGGTGCTCGAGTGACGCGAGCCATGGCTAGAGCTTTGAGAGAGGTATCTGCCTCCTCAAGACCATGCTTTAAGAAACAGCGCAAATTGGAGAAGAGCAGCAGAGCAGCGCTGACAGATATAACCAATGAATACAGAAAACCGCAGCTCAATAACTGTGCTGCTTCCAACTTTCAGACAAGAGGAGGCCATAGGAAGCGAACCACAAAGGGAGCTTCCAATGTCTCCATGCAAGTTTTGTCAACTCGAGATGTTCGAGCAAAGTCAGCAAAAGATTTATCCGCAATATCGATGGTACAGTCACATGACGATGTTTTTGCTGAAAGGCTGGAAGACAGAGAGCTAGTGCAACCTTCTATGTCTGTCATGGCAGGTCCCCTGCTTTCAATGCAGGACTCTGTGAAATCTGATGAACTCCTTGGCTCTCCGAACAAAGATATTGATATGATTTCAGAGAAACTAAAACATTCGGATGGTTTGGGCATTGTGGACATTGATTCAGTGGAGTTAAAGGATCCTCAAGTTTGGAGTTCATATGCCCCTGACATATACAATAATATATTTGTCCGAGAGTTTGAAAGGAGACTAACCGATTACATGGGCGAGCTGCAGAAAGATATCACTCCGAGCATGCGCGCAATTCTGATTGATTGGCTTGTGGAGGTTTCTGAGGAATATAAGCTAGTTCCAGATACTCTTTACCTTACTGTGAATCTCATTGATCGGTTTCTTTCTCAGAGTTTGATTCAGAAACAAGGCCTCCAGCTGCTGGGTGTTACTTGCATGCTGATTGCATCGAAGTATGAAGAGATTTGTGCTCCTCGAGTGGAAGAATTTTGCTTCATCACAGATAATACGTACACAAAGGCAGAGGTATTGAAAATGGAGAGTGAGGTTCTAAATCTGTTGCATTTTCAATTATCTGTTCCCACCGCTAAAACATTTCTCAGGAGGTTCATCCTAGCAGCACAATATTCTTGTAAGGTTTCTTATGTTGAAGTGGAATTTCTGGCAAATTATTTAGCAGAACTCACTCTTGTTGAATACAGCTTCTCGCAGTTTCGACCTTCCTTGATAGCTGCCTCTGCTGTATTAATAGCCAGATGGACCCTCAACCAGTCAGAACATCCATGGAATTCAACTATGGAACACTATACAAATTACAGAGTGTCAGAACTTAAAACTACTGTCCTTGCACTGGCAGATTTGCAACTTAATACCAAAGGCTGTCCTCTGAATGCTATACGTGACAAATATAAACAGCAGAAGTTCATGAGTGTGGCAAATTTGTCTCCAAAACCAGTGCAGTCACTTTTTGAGGCTGAAGTATAA 1371 0.4282 MDRENAVIGGGVRDGARVTRAMARALREVSASSRPCFKKQRKLEKSSRAALTDITNEYRKPQLNNCAASNFQTRGGHRKRTTKGASNVSMQVLSTRDVRAKSAKDLSAISMVQSHDDVFAERLEDRELVQPSMSVMAGPLLSMQDSVKSDELLGSPNKDIDMISEKLKHSDGLGIVDIDSVELKDPQVWSSYAPDIYNNIFVREFERRLTDYMGELQKDITPSMRAILIDWLVEVSEEYKLVPDTLYLTVNLIDRFLSQSLIQKQGLQLLGVTCMLIASKYEEICAPRVEEFCFITDNTYTKAEVLKMESEVLNLLHFQLSVPTAKTFLRRFILAAQYSCKVSYVEVEFLANYLAELTLVEYSFSQFRPSLIAASAVLIARWTLNQSEHPWNSTMEHYTNYRVSELKTTVLALADLQLNTKGCPLNAIRDKYKQQKFMSVANLSPKPVQSLFEAEV 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00639 456 PIRSF Cyclin_A_B_D_E 13 455 IPR046965 GO:0016538|GO:0044772
Phco2g00639 456 Pfam Cyclin, C-terminal domain 323 445 IPR004367 -
Phco2g00639 456 FunFam Mitotic cyclin 6 209 308 - -
Phco2g00639 456 Gene3D - 195 442 - -
Phco2g00639 456 PANTHER CYCLINS 155 434 IPR039361 -
Phco2g00639 456 Gene3D - 209 321 - -
Phco2g00639 456 Pfam Cyclin, N-terminal domain 195 321 IPR006671 -
Phco2g00639 456 SMART Cyclin_C_2 323 446 IPR004367 -
Phco2g00639 456 FunFam Cyclin A1 310 442 - -
Phco2g00639 456 CDD CYCLIN_AtCycA-like_rpt2 323 437 - -
Phco2g00639 456 SUPERFAMILY Cyclin-like 322 445 IPR036915 -
Phco2g00639 456 ProSitePatterns Cyclins signature. 225 256 IPR006671 -
Phco2g00639 456 SMART cyclin_7 327 415 IPR013763 -
Phco2g00639 456 SMART cyclin_7 230 314 IPR013763 -
Phco2g00639 456 SUPERFAMILY Cyclin-like 184 320 IPR036915 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00639 Phco-Chr2 6395516 6401272 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00639 2 6395516 6401272 Phco7g00802 7 6271341 6276182 PCT