Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00785 ATGGATAAATTAACAGCGAAGCATGTGAAGGATATGTTTGCTATGTTATGGGTACGGAAACACGATAGACGCATGCAGATTGATCCATGGTCCCAAGATGGAAGACAAAGCATCCTCAGCGGCGTTCCGCTTCCTTCTCTAGGCGCCGCAGCCGGCAGCACCGGGCCGAACCGCAGGATACGGCCATTCATCGTCTCGCCCTACAACCCTTATTACAGAGTTTGGGATGCGTTTCTGGTGATCTTAGTTTTCTACACTGCATTTGTCAGCCCCTTTGAGTTTGGATTTCTTAATGAACCAACGGATTCCCTTTCTATCACGGACAACGTGGTGAACGGTCTTTTTGCCGTTGACATTGTTCTCACCTTCTTTGTTGCCTACCTGGACAAGGAGACATATCTGCTCGAGGACCGCCCACTGCTAATTTGCTGCAAATACGTCACAACATGGTTTGCCTTCGATGTCATCTCCACGATCCCTTCTGAATTTGCCCGTTCTGTGTTGCCCGATCCTCTTCAGACATATGGCTATTTCAATATGCTACGTCTTTGGCGTCTCCGAAGAGTTAGTGCCATGTTTGCAAGATTAGAAAAGGACAGAAATTATAACTACTTTTGGATACGCTGTTGCAAGCTTGTATGTGTAACTCTATTTTCAATGCATTTTGCTGCCTGCCTTTTCTATTTTATAGCTCTAAATCGTGATCCAAAATCAACATGGCTAAGCATGGTCTCTGATGAAACTCAAAAGAGTATTTACAGTCGCTACGTAACATCAATCTACTGGTCAATAGTGACTCTTACAACAGTTGGTTATGGTGACCTGCATCCTGTAAATACCAAGGAGATGGTGTTTGACATATTTTATATGATGTTTAACCTGGGACTAACGGCATATCTAATAGGAAACATGACAAACTTAATTGTTCAAGGGACAAGCAGAACTAGAACATACAGAGACAACCTGCAAGCTGCCACAGATTTTGCCCACCGGAATCAGTTACCTATCCGCTTGCAAGAACAGATGCTTGCTCATTTGTTTATGAAGTACAGAACAGATTTAGAAGGACTGCAGCAACAAGAAATTATTGATTCACTTCCAAAGGCTATTCGATCTAGCATCTCAGACTACCTATTCACCTCACTTCTTGAGAAAGTGTACTTGTTTCATGGGGTGTCATCTGACCTACTCTTTCAACTGGTCTCGGAGATGAGGGTTGAGTATTTTCCTCCAAAGGAAGAAGTAATTTTGCGGAATGAAGCGCCCACAGACCTTTATATATTTGTTAATGGTGCTGCAGAACTCGTCATTAAAAGGAATGGAATAGAACAGGTCGTTGGTGAGGCTGTAAGTGGAGATATAGTTGGAGAAATTGGAGTTCTATGCTATAGGCCACAGATATTTACAGTTCGAACCAAACGATTGAGCCAGATTCTGCGTATGAGCCGTACTGCATTTCTAAATCTAGTTAATTCAAATGTTGGAAATGGGGGAATAGTCATGAACAATTTCCTCCAGAATTTGGAAGAATCAAGTTATCCAGAGAGGCATGTTATTTTGGCAGAAACGGCGGCCAAGATTGCTCAGGGTAAAATGGATATGCCCATTACCCTGTGCTTTGCAGCAATCAGAAATGATTATATATTGTTAGAGAGTTTGTTAAAGAAGGGTTTAGATCCAAATGAAGGAGATAAGAAAGGAAAGACGGCACTGCATATTGCAGCTTCCAAAGGCAGTGAGCAGTGCGTAAGTTTGCTTCTAGAGTATGGTGCTGATCCAAATAGCAAAGATTATAATGGAATTGTCCCACTACTGGAAGCAAGGAAGGGTGATCATAAATCTGTGATAAAACTTCTAAGAGAAAAGGGTGCAATTTTTACTTCTGCCGATGAAGGCAATCTAGCATGCAGGGCTGTTGAACAAAATAACAAAGAATTGCTCGAGGAAGTTATTGAGTGTGGTGTGGCTGTGTCACAACCCAACAAAGATGGAGACACTGCTCTCCATATTGCAGTAGTTGACTCAAACAATGACATGATTAACTTTCTTTTAGACCAAGGAGCAGTCACAGATATGCCAGATGCTACTGGGCGGACTCCCAGAGTTTTGACAGAAAAAGACGATAGTGAAGAGATTCACGCTGTATTAGGTGACACGGGGGAGAGCATAAAACCAGGTTTTATTCCAATAACAAAGGATAGCAGTATTGGAAGGTTTCTAAGAGATCCCAGCATGTCTGCCACTTCCCACCAAAGCCTGCCATCTACTAGAGAGTTTACTTGGCAAGATAGTAAAGGGAGAAGAAGGTCTTCTAGCTCTTTTCATAATTCCCTTTTCGGAATGCTCTCTACTGCCAATCGTGAGAGAAGGGCAAGGGAATCTGAAAACAGTGAAACTGTTAGAAGAAATGAGAGAGAGTTACCCAGAGTGATAATTAGTTGTCCTGAAAAAGGTGAACATGCTGGAAAACTTGTTTTGTTGCCCAAGTCCCTTGAAGAGCTGCTAGATATTGGTGCCAGTAAGTTTGCTATATCTCCCACCAAAATTTTGACCACAGAAGGAGCAGAAGTAGACCATATAAATCTTATAAGAGATGGTGATCATCTTGTTATTGCCGGCGATGATTCCTAA 2631 0.423 MDKLTAKHVKDMFAMLWVRKHDRRMQIDPWSQDGRQSILSGVPLPSLGAAAGSTGPNRRIRPFIVSPYNPYYRVWDAFLVILVFYTAFVSPFEFGFLNEPTDSLSITDNVVNGLFAVDIVLTFFVAYLDKETYLLEDRPLLICCKYVTTWFAFDVISTIPSEFARSVLPDPLQTYGYFNMLRLWRLRRVSAMFARLEKDRNYNYFWIRCCKLVCVTLFSMHFAACLFYFIALNRDPKSTWLSMVSDETQKSIYSRYVTSIYWSIVTLTTVGYGDLHPVNTKEMVFDIFYMMFNLGLTAYLIGNMTNLIVQGTSRTRTYRDNLQAATDFAHRNQLPIRLQEQMLAHLFMKYRTDLEGLQQQEIIDSLPKAIRSSISDYLFTSLLEKVYLFHGVSSDLLFQLVSEMRVEYFPPKEEVILRNEAPTDLYIFVNGAAELVIKRNGIEQVVGEAVSGDIVGEIGVLCYRPQIFTVRTKRLSQILRMSRTAFLNLVNSNVGNGGIVMNNFLQNLEESSYPERHVILAETAAKIAQGKMDMPITLCFAAIRNDYILLESLLKKGLDPNEGDKKGKTALHIAASKGSEQCVSLLLEYGADPNSKDYNGIVPLLEARKGDHKSVIKLLREKGAIFTSADEGNLACRAVEQNNKELLEEVIECGVAVSQPNKDGDTALHIAVVDSNNDMINFLLDQGAVTDMPDATGRTPRVLTEKDDSEEIHAVLGDTGESIKPGFIPITKDSSIGRFLRDPSMSATSHQSLPSTREFTWQDSKGRRRSSSSFHNSLFGMLSTANRERRARESENSETVRRNERELPRVIISCPEKGEHAGKLVLLPKSLEELLDIGASKFAISPTKILTTEGAEVDHINLIRDGDHLVIAGDDS 876
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 282 293 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 108 118 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 119 128 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 85 92 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 256 273 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 300 309 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 PRINTS EAG/ELK/ERG potassium channel family signature 67 76 IPR003938 GO:0005249|GO:0006813|GO:0016020
Phco7g00785 876 MobiDBLite consensus disorder prediction 741 760 - -
Phco7g00785 876 Gene3D Jelly Rolls 354 518 IPR014710 -
Phco7g00785 876 Pfam Ankyrin repeat 663 688 IPR002110 GO:0005515
Phco7g00785 876 FunFam Potassium channel KAT3 74 310 - -
Phco7g00785 876 PANTHER POTASSIUM CHANNEL AKT1 36 872 IPR045319 GO:0005249|GO:0006813
Phco7g00785 876 SMART ANK_2a 566 595 IPR002110 GO:0005515
Phco7g00785 876 SMART ANK_2a 599 628 IPR002110 GO:0005515
Phco7g00785 876 SMART ANK_2a 663 692 IPR002110 GO:0005515
Phco7g00785 876 SMART ANK_2a 533 562 IPR002110 GO:0005515
Phco7g00785 876 SMART ANK_2a 630 659 IPR002110 GO:0005515
Phco7g00785 876 Pfam KHA, dimerisation domain of potassium ion channel 808 871 IPR021789 -
Phco7g00785 876 ProSiteProfiles KHA domain profile. 809 876 IPR021789 -
Phco7g00785 876 MobiDBLite consensus disorder prediction 739 774 - -
Phco7g00785 876 SUPERFAMILY Voltage-gated potassium channels 67 309 - -
Phco7g00785 876 SUPERFAMILY Ankyrin repeat 530 716 IPR036770 -
Phco7g00785 876 ProSiteProfiles Ankyrin repeat profile. 663 695 IPR002110 GO:0005515
Phco7g00785 876 Coils Coil 629 649 - -
Phco7g00785 876 Gene3D - 534 717 IPR036770 -
Phco7g00785 876 SUPERFAMILY cAMP-binding domain-like 313 494 IPR018490 -
Phco7g00785 876 Pfam Cyclic nucleotide-binding domain 407 493 IPR000595 -
Phco7g00785 876 ProSiteProfiles Ankyrin repeat region circular profile. 566 597 - -
Phco7g00785 876 SMART cnmp_10 388 505 IPR000595 -
Phco7g00785 876 ProSiteProfiles Ankyrin repeat profile. 566 598 IPR002110 GO:0005515
Phco7g00785 876 Pfam Ion transport protein 73 315 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Phco7g00785 876 CDD CAP_ED 388 493 IPR000595 -
Phco7g00785 876 ProSiteProfiles Ankyrin repeat region circular profile. 663 694 - -
Phco7g00785 876 Gene3D - 75 310 - -
Phco7g00785 876 Pfam Ankyrin repeats (3 copies) 539 625 IPR002110 GO:0005515
Phco7g00785 876 FunFam Potassium channel KAT2 377 512 - -
Phco7g00785 876 ProSiteProfiles cAMP/cGMP binding motif profile. 388 507 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00785 Phco-Chr7 6084288 6090456 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00785 7 6084288 6090456 Phco7g00785 7 6084288 6090456 ECH
Phco2g00616 2 6099903 6107918 Phco7g00785 7 6084288 6090456 PCT