Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00769 ATGGGTAGGAGGAGAATGCAACTGGCTGATGAGAAAAGTAATGGGTTTTTCTCTGTCAGCTGCTTGGGGTTCCAATCCGAAGATAGATGCTACCAGTTCGGAGGCTTGTTTGCCAGTGTTGGTCAGATGGGAATGGGGGTTGGCGTGCAACCGAGCGACCCTTCTGATTCGCGCGACAATGGTGGCACGAAGTTCCCCTTCAATGAACTGTTCCTCAAGTACCAGGGAAAAGATGAGGTTGTTGAAGAAAGGGTTGATGGCAAGAAGAGAAAGGGTGGTGTTTCACTACGGCTTAAGATCAGAAACCCTGCTCTGAGAAGGTTGTTTAGTGGGGCAATAGCTGGGGCTGTGTCTCGGACTGCTGTGGCACCTTTGGAGACTATAAGAACTCTTATGATGGTGGGGAGTAGTAACCATTCCACCACTGAGGTGTTCCACAATATCGTGAAAACTGATGGCTGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTCATTCGGGTTGCGCCTAGCAAGGCCATTGAGCTATTTACTTTCGATACAGTGAACAAGAACCTATCCCCAAAGCCCGGGGAGAAGTCGAAATTCCCAATTCCTGCATCATTGATTGCAGGTGCCTGTGCTGGAGTGACTTCAACTATCTGTACATATCCTCTTGAATTAGTCAAGACTCGACTAACTGTCCAGAGAGATCTTTATGATGGTCTGCTTCATGCATTCGTGAAAATAATTCGAGAAGAGGGTCCTGCGGAACTTTACAGTGGACTTGCAGCTAGTCTCATCGGAGTTGTCCCCTATGCTGCAGCCAATTACTATGCCTATGACACTTTAAAGAAAGCATACAGGAAAGTTTTTAAACAAGAGAAGGTGGGGAATATTGAAACCCTTTTGATCGGGTCGGTAGCTGGTGCTATTTCAAGTAGTTCAACTTTTCCACTGGAGGTAGCTCGCAAGCAAATGCAGCTTGGTACCATCAGTGGAAGGCAGGTTTACAAGAATGTGTTTCATGCCCTTGCATGCATACTAGAACAAGAAGGGATGCAAGGTTTATTCAGAGGGTTGGTACCTAGTTGCATGAAGTTGATACCAGCCGCTGGAATCTCTTTCATGTGCTACGAAGCATGCAAGAGGGTATTTCTTGAGAACGATGAGGAGGATTAG 1161 0.4643 MGRRRMQLADEKSNGFFSVSCLGFQSEDRCYQFGGLFASVGQMGMGVGVQPSDPSDSRDNGGTKFPFNELFLKYQGKDEVVEERVDGKKRKGGVSLRLKIRNPALRRLFSGAIAGAVSRTAVAPLETIRTLMMVGSSNHSTTEVFHNIVKTDGWKGLFRGNFVNVIRVAPSKAIELFTFDTVNKNLSPKPGEKSKFPIPASLIAGACAGVTSTICTYPLELVKTRLTVQRDLYDGLLHAFVKIIREEGPAELYSGLAASLIGVVPYAAANYYAYDTLKKAYRKVFKQEKVGNIETLLIGSVAGAISSSSTFPLEVARKQMQLGTISGRQVYKNVFHALACILEQEGMQGLFRGLVPSCMKLIPAAGISFMCYEACKRVFLENDEED 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00769 386 Pfam Mitochondrial carrier protein 103 186 IPR018108 -
Phco7g00769 386 Pfam Mitochondrial carrier protein 197 283 IPR018108 -
Phco7g00769 386 Pfam Mitochondrial carrier protein 290 382 IPR018108 -
Phco7g00769 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 196 280 IPR018108 -
Phco7g00769 386 Gene3D Mitochondrial carrier domain 99 384 IPR023395 -
Phco7g00769 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 290 378 IPR018108 -
Phco7g00769 386 ProSiteProfiles Solute carrier (Solcar) repeat profile. 102 185 IPR018108 -
Phco7g00769 386 PANTHER SOLUTE CARRIER FAMILY 25 103 379 - -
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 253 271 IPR002067 GO:0055085
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 107 120 IPR002067 GO:0055085
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 160 180 IPR002067 GO:0055085
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 299 321 IPR002067 GO:0055085
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 211 229 IPR002067 GO:0055085
Phco7g00769 386 PRINTS Mitochondrial carrier protein signature 120 134 IPR002067 GO:0055085
Phco7g00769 386 SUPERFAMILY Mitochondrial carrier 103 374 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00769 Phco-Chr7 5971570 5974825 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00769 7 5971570 5974825 Phco7g00769 7 5971570 5974825 ECH
Phco2g00602 2 5896056 5898856 Phco7g00769 7 5971570 5974825 PCT