Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00602 ATGGGTGGGAGAGGGATCAAGCTCTTTGATGAAGAAAGGAATGGTCTTTTTTCAATTTCCAATTTCGGGTCTCAATGGGGTGGCGGTATTCACGACCCTGCGGCTATGGCTATGTTTGCCAGCGTTAGTCAAATGGGAATGGGGTTTGGCGTTCAAGAGCCAAACCCTTCTTCTTCTGGTGATTCCCAGCACAATGGTGGCATGAACATTAGAATCCCTTGCACTGAGTTGTACGTTAGGTATGTTCAATCAGAGGGGAAGGTGAAGATTACTGGGATTTCTGAGGAAGAAGAGGGGGTGGCGGGTGTTAAGGGGAAGAAAAAGGGTGTCTTTAAAGGGTTGAGAATCAAGGTGAAGAACCCTTCTCTTAGGAGGTTGATTAGTGGTGCCTTTGCTGGGGCTGTGTCACGGACCACTGTGGCACCCTTGGAGACCATTAGGACTCATTTGATGGTAGGAAGTAGTGGGAATTCTACTGGGGAGGTGTTCAACAATATCATGAAGACTGATGGATGGAAGGGCTTGTTTAGGGGTAATTTTGTTAATGTGATTCGGGTTGCACCTAGCAAGGCCATTGAGCTATTTGCATATGATACTGTAAACAAGAACCTCTCATCAAAGCCAGGGGAGCAGCCTAAACTCCCTATTCCTCCATCATTGATTGCAGGTGCTTGTGCTGGAGTTACTTCAACGATATGCACATATCCTCTGGAGTTACTAAAGACTCGACTGACAATCCAGAGGGGTGTTTATGATGGTCTGCTAGATGCATTCCTAAAAATAGTGAGAGAAGAGGGTGCTGGAGAACTTTACAGAGGCCTCACTCCCAGCCTTATTGGAGTAATACCATATTCTGCCACCAATTACTTTGCATATGACACCTTAAGGAAAGCATACAGAAAAATTTTCAAAAAAGAGAAGATTGGCAACATTGAAACCCTTCTGATAGGATCTGCAGCTGGTGCTATTTCAAGTAGTGCTACCTTTCCTCTTGAAGTGGCCCGCAAGCACATGCAAGTGGGAGCCCTGAGTGGAAGGCAAATATACAAAAATGTGATTCATGCCCTTGCAAGCATTCTTGAGCAAGAAGGGATTCAAGGATTGTACAAAGGGTTGGGACCTAGCTGCATGAAGTTGGTGCCAGCTGCAGGAATTTCTTTCATGTGCTATGAAGCATGCAAGAGGATACTGGTAGAGGACCAAGATGAGGAGTAG 1215 0.4568 MGGRGIKLFDEERNGLFSISNFGSQWGGGIHDPAAMAMFASVSQMGMGFGVQEPNPSSSGDSQHNGGMNIRIPCTELYVRYVQSEGKVKITGISEEEEGVAGVKGKKKGVFKGLRIKVKNPSLRRLISGAFAGAVSRTTVAPLETIRTHLMVGSSGNSTGEVFNNIMKTDGWKGLFRGNFVNVIRVAPSKAIELFAYDTVNKNLSSKPGEQPKLPIPPSLIAGACAGVTSTICTYPLELLKTRLTIQRGVYDGLLDAFLKIVREEGAGELYRGLTPSLIGVIPYSATNYFAYDTLRKAYRKIFKKEKIGNIETLLIGSAAGAISSSATFPLEVARKHMQVGALSGRQIYKNVIHALASILEQEGIQGLYKGLGPSCMKLVPAAGISFMCYEACKRILVEDQDEE 404
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00602 404 Pfam Mitochondrial carrier protein 308 399 IPR018108 -
Phco2g00602 404 Pfam Mitochondrial carrier protein 121 205 IPR018108 -
Phco2g00602 404 Pfam Mitochondrial carrier protein 214 301 IPR018108 -
Phco2g00602 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 214 298 IPR018108 -
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 125 138 IPR002067 GO:0055085
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 271 289 IPR002067 GO:0055085
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 317 339 IPR002067 GO:0055085
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 178 198 IPR002067 GO:0055085
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 138 152 IPR002067 GO:0055085
Phco2g00602 404 PRINTS Mitochondrial carrier protein signature 229 247 IPR002067 GO:0055085
Phco2g00602 404 Gene3D Mitochondrial carrier domain 116 402 IPR023395 -
Phco2g00602 404 PANTHER SOLUTE CARRIER FAMILY 25 117 397 - -
Phco2g00602 404 SUPERFAMILY Mitochondrial carrier 121 392 IPR023395 -
Phco2g00602 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 308 396 IPR018108 -
Phco2g00602 404 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 203 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00602 Phco-Chr2 5896056 5898856 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00602 2 5896056 5898856 Phco2g00602 2 5896056 5898856 ECH
Phco2g00602 2 5896056 5898856 Phco7g00769 7 5971570 5974825 PCT