Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00764 ATGGTGTTTGTTGCTTTGATGGTTCATGATGGTATTGAGAGGTGGTCGTTTGTAGTGGTGATGGCAGATTGGGCTAATATAATAAACAAGGCGGTGACGGCTTTCTATAAAAAGGTGGTGCCCTTTAACCCTATTGTCACTCGCTCATCCACTAACTGCGACTCGCTCATCCCGTGGAGGTTTCGCTCTCTCAGTTTCTTTTCCCCAAATTGTTTTTCATCTAACAATTTACTTTGCAGACTCTCTCTCTCAACCCTATCTCTAACCCTAACACCCCTCCATCCAACCTTCCTTTTCATCCTTCATCTCGCAGGTATTTCCCTCTTCCAAAACCCTACAAATCTCTATCTAGGGCAAAACCCTAGCTTAATTTATCATTCGATTTGCATAATGGGAGAAACCAAGGACGAAACATACGAGGAAGAGCTTATTGACTATGAGGAGGAAGAAGACAAGGCTCCCGACTCCGTCGGAGCTAAAGTCAACGGCGAAGCTACCAAGAAGGGCTATGTTGGAATTCACAGTTCAGGATTCAGAGACTTTCTTCTGAAGCCAGAGCTTCTTCGGGCTATTGTGGACTCGGGATTTGAGCATCCTTCTGAAGTGCAACATGAGTGCATCCCTCAAGCAATTCTAGGAATGGATGTAATTTGCCAAGCGAAATCTGGAATGGGAAAGACTGCTGTATTTGTTCTCTCGACTCTGCAGCAGATTGATCCCGTTCCTGGCCAAGTTTCTGCTCTTGTTCTGTGTCATACAAGAGAATTAGCATACCAGATATGCCATGAGTTTGAGAGGTTCAGTACCTATTTACCCGATCTCAAGGTTGCTGTCTTTTATGGTGGGGTCAACATCAAAGTTCACAAGGATCTGCTGAAAAATGAGTGCCCTCATATTGTTGTCGGAACACCTGGAAGAATACTAGCATTGACTAGGGATAAAGATCTTTCTTTGAAGAATGTGAGACATTTCATATTAGATGAATGTGACAAGATGCTGGAATCACTGGATATGAGGAAAGATGTTCAAGACATTTTCAAGATGACTCCCCATGATAAGCAAGTTATGATGTTTTCCGCAACACTCAGCAAGGAAATTCGCCCAGTCTGCAAGAAATTTATGCAAGATCCTATGGAAATTTATGTTGATGATGAGGCCAAGTTGACACTTCACGGACTTGTGCAGCACTACATCAAATTGAAAGAGGAGGAGAAAAACCGGAAGTTGAATGATCTTCTTGATGCATTGGACTTTAATCAAGTTGTTATATTTGTTAAAAGTGTCAGTAGAGCAGCCGAGCTGGACAAACTACTTGTGGAGTGCAACTTTCCTTCTATATGCATCCACTCTGGCATGTCCCAGGAAGAAAGGTTAAAGCGTTATAAAGGTTTCAAAGAGGGGCATACAAGGATTCTTGTTGCAACAGATTTGGTTGGAAGAGGGATTGACATTGAACGTGTCAACATTGTTATAAACTATGACATGCCTGATTCTGCAGACACATACTTGCACAGGGTTGGTCGAGCTGGAAGATTTGGCACCAAAGGCCTTGCAATTACATTTGTTTCTTGTTCTACTGATGTTGATGTTCTCAACAATGTTCAGTCAAGGTTTGAGGTGGATATAAAACAGCTGCCTGAGCAGATTGATACCTCAACTTATATGCCATCGTAG 1674 0.4253 MVFVALMVHDGIERWSFVVVMADWANIINKAVTAFYKKVVPFNPIVTRSSTNCDSLIPWRFRSLSFFSPNCFSSNNLLCRLSLSTLSLTLTPLHPTFLFILHLAGISLFQNPTNLYLGQNPSLIYHSICIMGETKDETYEEELIDYEEEEDKAPDSVGAKVNGEATKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQIDPVPGQVSALVLCHTRELAYQICHEFERFSTYLPDLKVAVFYGGVNIKVHKDLLKNECPHIVVGTPGRILALTRDKDLSLKNVRHFILDECDKMLESLDMRKDVQDIFKMTPHDKQVMMFSATLSKEIRPVCKKFMQDPMEIYVDDEAKLTLHGLVQHYIKLKEEEKNRKLNDLLDALDFNQVVIFVKSVSRAAELDKLLVECNFPSICIHSGMSQEERLKRYKGFKEGHTRILVATDLVGRGIDIERVNIVINYDMPDSADTYLHRVGRAGRFGTKGLAITFVSCSTDVDVLNNVQSRFEVDIKQLPEQIDTSTYMPS 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00764 557 SMART ultradead3 195 396 IPR014001 -
Phco7g00764 557 Gene3D - 172 388 IPR027417 -
Phco7g00764 557 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 176 204 IPR014014 GO:0003724
Phco7g00764 557 CDD DEADc_DDX39 175 382 - -
Phco7g00764 557 FunFam DEAD-box ATP-dependent RNA helicase 389 557 - -
Phco7g00764 557 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 245 527 IPR027417 -
Phco7g00764 557 PANTHER ATP-DEPENDENT RNA HELICASE DBP3 174 531 - -
Phco7g00764 557 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 392 553 IPR001650 -
Phco7g00764 557 SMART helicmild6 432 513 IPR001650 -
Phco7g00764 557 Pfam DEAD/DEAH box helicase 201 366 IPR011545 GO:0003676|GO:0005524
Phco7g00764 557 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 207 380 IPR014001 -
Phco7g00764 557 CDD SF2_C_DEAD 393 522 - -
Phco7g00764 557 Gene3D - 389 556 IPR027417 -
Phco7g00764 557 FunFam DEAD-box ATP-dependent RNA helicase 56-like 164 382 - -
Phco7g00764 557 Pfam Helicase conserved C-terminal domain 406 513 IPR001650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00764 Phco-Chr7 5932256 5941008 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00764 7 5932256 5941008 Phco7g00764 7 5932256 5941008 ECH
Phco7g00764 7 5932256 5941008 Phco2g00598 2 5839177 5848205 ECH
Phco2g00598 2 5839177 5848205 Phco7g00764 7 5932256 5941008 PCT