Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00748 ATGGATGACAATCGAGCCTTCGTGATGCATATGGGTGAGAGAAGCTTGATGATTGTTTCCAACGGAAGGCATCGGCGATCACCCAGCATGAGCCACATAGACGACAATTTTTCCTACTACAGCCTTCCTTCCGAAACGCTCAACCTCTCCATCATCAAATTGGACGCCTCTTCCTTCCGCGTTGAAGTTGCAAATGAAGCAACTGTTGGAGAACTCAAGCAGGCCGTGGAGGCGATTTTCGCTCACGTGCCTCTGAAGGCCCCGGGGAAAATATTGTGGCCACTTGTTTGGCGGCAATTTTGCTTATCCTATCAAGGACATAAATTAGTTACAGAAACGGATTACCTTCGAGATTATGGCATCAAGGATGGTGACCAGCTTCATTTCGTGCGCCATATATCTGACACTTGCAGTTACCAGAGTAAGCAGTCAAAGAAACGAGCTTTCAATTTGAAACAACACAGGAGGTCATCGTCTCATGAACTGAATAGACATCAAAAGAAAGAACATAACGATGACGACGACATTGGTTTGAATGGTATTGTCATAGAGAATGGGAAGATCCAGAATTGCAAGGCAGAAGAAATTCGAGGAGGAAAGAGCTGGTTATCTGGTTTTTTGGGAGGACTATCCTCACACAGCCGTCTGCCAGTTGTGAGAATAGCGAGCACTGAGGGTAGGATTTGCTGCTCAATGATAGCCAGATTTATTGTGGACAGTTTTAGAAAAATTAGAAGAATTATACGCCATTGGAGGGGGCTGCATTACTCTCGGAGACCCACATGGAGAGAATTTTGA 798 0.4524 MDDNRAFVMHMGERSLMIVSNGRHRRSPSMSHIDDNFSYYSLPSETLNLSIIKLDASSFRVEVANEATVGELKQAVEAIFAHVPLKAPGKILWPLVWRQFCLSYQGHKLVTETDYLRDYGIKDGDQLHFVRHISDTCSYQSKQSKKRAFNLKQHRRSSSHELNRHQKKEHNDDDDIGLNGIVIENGKIQNCKAEEIRGGKSWLSGFLGGLSSHSRLPVVRIASTEGRICCSMIARFIVDSFRKIRRIIRHWRGLHYSRRPTWREF 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00748 265 MobiDBLite consensus disorder prediction 149 176 - -
Phco7g00748 265 SUPERFAMILY Ubiquitin-like 42 136 IPR029071 -
Phco7g00748 265 CDD Ubl_SNRNP25 49 132 IPR040610 -
Phco7g00748 265 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 28 249 IPR039690 GO:0000398|GO:0005689
Phco7g00748 265 MobiDBLite consensus disorder prediction 154 176 - -
Phco7g00748 265 Pfam Ubiquitin-like domain 48 133 IPR040610 -
Phco7g00748 265 Gene3D - 41 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00748 Phco-Chr7 5816266 5818143 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00748 7 5816266 5818143 Phco7g00748 7 5816266 5818143 ECH
Phco7g00748 7 5816266 5818143 Phco2g00584 2 5660448 5663250 ECH
Phco2g00584 2 5660448 5663250 Phco7g00748 7 5816266 5818143 PCT