Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00584 ATGTCCCACCACCAAACCACCTTCATGCTCACCCCTTCCCGCTCCTCCTCCCTCCCCCTCATCCACGCCATCTTCTCCAGAAAAACCCTCTTCTACAACCGACTTCCCTCCCTACCCCTCCGACTCTCCGTCCTCAAACTCGACGGTTCCTGCTTCCATATTCAGGTTTCCAAGACGGCCACTGTTGCCGAACTCAAAGACGCAGTCGAGGCTCTCTTCTCCCACGCGCCTCTCAAAGGTCCCGCCAAAATTTCATGGGCGCATGTCTGGGGGCAGTTTTGCTTATGCTATGATGGACAGAAGCTGGTTACCGAGAATGATTATCTTAGAAATTATGGCATCAAGGATGGTGACCAGCTTCGTTTCATCCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGTTGAAGAAAAGAATTGTCTATTTGAAACAGCACAGGAGGTGCAGGTCTTCTCCAGTGGATAGCCATCAACACAAAGGAAAGTGTGATAATGATGAGATTGGTTCTGATGATGAAGCCACGGATAATGAGAAGCATGATATTGAAGAAGGAGAAGAAGAGCGTGTTGTAAAGAACAAATTTGCTGGCTTTGTGGGAGAGTTGTTCTCATACACTCCACTAGCAGTTGTGAGAAGAACTACTACTAAAAACAGAATTTGGCCATCAACTATTCCCAGATGTTTGCTGGGTAGTTTTAGAAAGATTAGAAGTATTGTATGCTTTGGCAGGAGGAGGCCCTATTCTCGGAGACTTACATGGAAACATATGGGATAA 780 0.4667 MSHHQTTFMLTPSRSSSLPLIHAIFSRKTLFYNRLPSLPLRLSVLKLDGSCFHIQVSKTATVAELKDAVEALFSHAPLKGPAKISWAHVWGQFCLCYDGQKLVTENDYLRNYGIKDGDQLRFIRHVSNNCCVQRKRLKKRIVYLKQHRRCRSSPVDSHQHKGKCDNDEIGSDDEATDNEKHDIEEGEEERVVKNKFAGFVGELFSYTPLAVVRRTTTKNRIWPSTIPRCLLGSFRKIRSIVCFGRRRPYSRRLTWKHMG 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00584 259 CDD Ubl_SNRNP25 40 125 IPR040610 -
Phco2g00584 259 Gene3D - 37 133 - -
Phco2g00584 259 SUPERFAMILY Ubiquitin-like 39 131 IPR029071 -
Phco2g00584 259 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 15 241 IPR039690 GO:0000398|GO:0005689
Phco2g00584 259 MobiDBLite consensus disorder prediction 153 185 - -
Phco2g00584 259 Pfam Ubiquitin-like domain 40 126 IPR040610 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00584 Phco-Chr2 5660448 5663250 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00584 2 5660448 5663250 Phco2g00584 2 5660448 5663250 ECH
Phco7g00748 7 5816266 5818143 Phco2g00584 2 5660448 5663250 ECH
Phco2g00584 2 5660448 5663250 Phco7g00748 7 5816266 5818143 PCT