Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00711 ATGCTGCGTAAGCTTGTGTCAGGGCCACGCAAGAACAAGCCTGGCACCGTCCCCGTTCACCTCAACGTCTATGATCTCACCCCAATCAATGGCTATGCCTATTGGCTTGGCCTTGGTGTCTACCATTCTGGGGTTCAAGTTCATGGAGTTGAGTACGGTTTTGGTGCGCACGAGCATGACACAACGGGGATTTTTGAAGTGCAACCGAAACACTGTCCCGGGTTCACTTTCAGAAAGTCGATTTTCATTGGAACAACAGATCTGGGTCCGAAAGATGTTCGCGCGTTCATGGAGAAGTTGGCTCGGGAGTACTCTGGAAACACCTATCATCTCATCTCCAAAAACTGCAACCACTTCTGTAACGATGTTTGTCTCAAGTTAACGGGAAGGTCAATCCCTCGGTGGGTCAATCGCCTTGCTCGACTTGGTCTTCTGTGCAATTGCGTTCTCCCCCCTGGCCTAAATGAGACAAAGGTTCCACACGCCACATCAGAGAGAGTTCAGGAGGGAGAAAAGAGGAAAATGAGAAGTCAATCCTGCAGGTACGAGGGTTCCTCCAATCCTTCATTGTCTCGACGTTCAGCAATTAAAAGTGGTAGCCAAAGACATTGTCTTTCTGGATCTTCATCTCTGGTTAATACGGCTTCAGCCTCGACAACCTTAACAGTAGTGAAGTAG 678 0.4882 MLRKLVSGPRKNKPGTVPVHLNVYDLTPINGYAYWLGLGVYHSGVQVHGVEYGFGAHEHDTTGIFEVQPKHCPGFTFRKSIFIGTTDLGPKDVRAFMEKLAREYSGNTYHLISKNCNHFCNDVCLKLTGRSIPRWVNRLARLGLLCNCVLPPGLNETKVPHATSERVQEGEKRKMRSQSCRYEGSSNPSLSRRSAIKSGSQRHCLSGSSSLVNTASASTTLTVVK 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00711 225 PANTHER DESUMOYLATING ISOPEPTIDASE 16 197 IPR008580 GO:0008233
Phco7g00711 225 Pfam PPPDE putative peptidase domain 18 150 IPR008580 GO:0008233
Phco7g00711 225 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Phco7g00711 225 MobiDBLite consensus disorder prediction 162 179 - -
Phco7g00711 225 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Phco7g00711 225 MobiDBLite consensus disorder prediction 161 193 - -
Phco7g00711 225 Gene3D PPPDE domains 12 172 IPR042266 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00711 Phco-Chr7 5455423 5457064 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00544 2 5185255 5186952 Phco7g00711 7 5455423 5457064 PCT