Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00544 ATGTTCTGCAAACTCGTTCCTGTGCCACGCAAGAGAAAACCTGGTTCGAACCCGGTTTACCTTAACGTCTACGATCTAACACCTATGAACGGTTATGCTTATTGGCTTGGCCTCGGAGTTTACCATTCTGGTGTTCAAGTTCATGGGGTTGAGTATGGATTTGGAGCCCATGAACGTGACACGACTGGGATTTTTGAAGTGGAGCCTAGACACTGTCCTGGATTCATCTTCAGGAAATCGATTTTCATTGGATCGACGGATATGGGGGCGAAGGAGGTTCGTGAGTTAATGGAGAGGATGGCTGAAGAGTATTCCGGGAACACCTACCACCTTATCCAGAAAAACTGCAATCACTTCTGTGATGATGTTTGTGGCAAACTAACGGGAAAGTCTACCCCTCGGTGGGTGAATCGACTTGCTAGAATTGGTTTTCTCTGCAACTGTGTTCTTCCACCCAGCCTAAATGAAACAAAGGTTCGCCAAGTTACATTAGACAGGGTTCAAGACGGAGAGAAGAAGAAAACGAGAACGCATTGCAGTAGGTATGAGGCTTCACCCAATCCTCCGTTGTCTAGTAGCCGAAGGCATTGCCTTCCTCCGTCTTCTGTAATTAATGCTTCCCCGTCCTCAACCTTAACAGTAAAGTGA 648 0.4676 MFCKLVPVPRKRKPGSNPVYLNVYDLTPMNGYAYWLGLGVYHSGVQVHGVEYGFGAHERDTTGIFEVEPRHCPGFIFRKSIFIGSTDMGAKEVRELMERMAEEYSGNTYHLIQKNCNHFCDDVCGKLTGKSTPRWVNRLARIGFLCNCVLPPSLNETKVRQVTLDRVQDGEKKKTRTHCSRYEASPNPPLSSSRRHCLPPSSVINASPSSTLTVK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00544 215 SMART DUF862_2a 17 155 IPR008580 GO:0008233
Phco2g00544 215 Gene3D PPPDE domains 12 172 IPR042266 -
Phco2g00544 215 MobiDBLite consensus disorder prediction 165 215 - -
Phco2g00544 215 MobiDBLite consensus disorder prediction 181 215 - -
Phco2g00544 215 PANTHER DESUMOYLATING ISOPEPTIDASE 16 177 IPR008580 GO:0008233
Phco2g00544 215 ProSiteProfiles PPPDE domain profile. 17 154 IPR008580 GO:0008233
Phco2g00544 215 MobiDBLite consensus disorder prediction 165 180 - -
Phco2g00544 215 Pfam PPPDE putative peptidase domain 18 151 IPR008580 GO:0008233
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00544 Phco-Chr2 5185255 5186952 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00544 2 5185255 5186952 Phco7g00711 7 5455423 5457064 PCT