Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00700 ATGGCAAAGTGTCACCGGAATAACGTCGGATCCATCGCTCTCGACCACCGACACACGGCCAAAAATGCCACCGCTGGCAGCCACTTCCGCTTGCTCCGCCGCTTGATCTTCGACGCCGTCAGCTGCGGCAGCACCTCTCGCTACCGGTATCGCCAGCGTGGCAGCGACGATGGAGACGTTGGCGACTTTAGCTCGGAGGCTAGCCATGCAGAGAAGGAGGAGAGGTCAGAGAAGAGGTCGGAGAAGCTGTCGGATCTGCTGAACGCGGCGGAGATGAAAATGGAGGCGGAGGCGGAGAGGAAGGAAGAGGCATTGGCGGAGCTGAAGCGAGTGGTGAAGGAGTTGCGCGAAGAAGACCTCACGATGCGGAGAATCACGGCGGCGAGAGTGAGGTCGCTAGCCAAGGAAGATTCCGAAGCGAGAGCGAATCTCGCAATGCTAGGAGCAATTCCCCCTCTCGTCGGAATGCTCGATTCGGAAGACGCTAATTCGCAAATCGCTTCGCTCTATGCTTTGCTCAATCTCGGAATCGGCAACGATGCAAACAAAGCGGCTATAGTGAAAATAGGCACCGTACACAAGATGCTGAAGCTAGTTGAATCGAATGATTCGGATTCGTCGGTGGCCGAAGCGATTGTTGCGAATTTCCTTGGATTGAGTGCTTTGGATTCGAATAAACCGATAATTGGATCCTCCGGTGCAATACCGTTCCTGGTTAGCACCCTAAAAAATTTAGACGCTACTAAAACCGTATCACAATCCCAGTCGCAAGTGAAGCAAGATGCTCTGCGCGCTTTGTACAATCTTTCGATCTGTCAGAGCAACGTTTCGGTGGTTTTGGAGACTGATTTGGTTTGGTTTTTAGTGAGCGCGATGGGGGACATGGAAGTGAGCGAGAGAAGTCTGGCGATTCTGAGCAATTTAGTGTCGACTCCGGAGGGAAGAAAAGCGATCAGTGGAGTGAGGGACGCGATTCCGATTCTGGTGGATGTGTTGAGTTGGACGGACTCGCCAGAGTGCCAAGAGAAGGCGTCGTATGTACTGATGATTATGGCACACAGAACTTACGGGGACAGGCTGGCCATGATCGAGGCAGGGGTTGTGTCGTCGCTGCTTGAGTTGACGCTTGTCGGAACCACGTTAGCTCAGAAGAGGGCCTCCAGAATATTGGAGTGTTTGAGGGTGGATAAGGGGAAACAGGTTTCTAGGAGCTACGCTGCAAACTTGAATTTGGGTGTCTCTGCTCCTATTTGTGGTGGCTCTACTTCATCCGAGGGTGGTGGTGGAGGAGGAAAAGGGTCCTTGGTGGAGGAGGAAGATGGAATGGCGATGAGTGAGGAAAAGAAAGCGGTGAAACAGTTAGTGCAGCAGAGTCTGCAGAATAACATGATTAAAATCGTGAAGAGGGCCAACTTGCGCCAGGATTTCGTTCCATCTGCCCAAATTGCTTCACTCACTTCGAGTTCCACTTCAAAGAGCCTCCCATTTTGA 1491 0.5238 MAKCHRNNVGSIALDHRHTAKNATAGSHFRLLRRLIFDAVSCGSTSRYRYRQRGSDDGDVGDFSSEASHAEKEERSEKRSEKLSDLLNAAEMKMEAEAERKEEALAELKRVVKELREEDLTMRRITAARVRSLAKEDSEARANLAMLGAIPPLVGMLDSEDANSQIASLYALLNLGIGNDANKAAIVKIGTVHKMLKLVESNDSDSSVAEAIVANFLGLSALDSNKPIIGSSGAIPFLVSTLKNLDATKTVSQSQSQVKQDALRALYNLSICQSNVSVVLETDLVWFLVSAMGDMEVSERSLAILSNLVSTPEGRKAISGVRDAIPILVDVLSWTDSPECQEKASYVLMIMAHRTYGDRLAMIEAGVVSSLLELTLVGTTLAQKRASRILECLRVDKGKQVSRSYAANLNLGVSAPICGGSTSSEGGGGGGKGSLVEEEDGMAMSEEKKAVKQLVQQSLQNNMIKIVKRANLRQDFVPSAQIASLTSSSTSKSLPF 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00700 496 SMART arm_5 222 271 IPR000225 GO:0005515
Phco7g00700 496 SMART arm_5 137 177 IPR000225 GO:0005515
Phco7g00700 496 SMART arm_5 272 310 IPR000225 GO:0005515
Phco7g00700 496 SMART arm_5 311 353 IPR000225 GO:0005515
Phco7g00700 496 SMART arm_5 179 221 IPR000225 GO:0005515
Phco7g00700 496 Gene3D - 75 251 IPR011989 -
Phco7g00700 496 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 27 496 - -
Phco7g00700 496 MobiDBLite consensus disorder prediction 50 81 - -
Phco7g00700 496 Coils Coil 73 121 - -
Phco7g00700 496 Gene3D - 252 410 IPR011989 -
Phco7g00700 496 SUPERFAMILY ARM repeat 108 396 IPR016024 -
Phco7g00700 496 MobiDBLite consensus disorder prediction 422 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00700 Phco-Chr7 5369710 5371295 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00533 2 5027832 5034291 Phco7g00700 7 5369710 5371295 PCT