Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00533 ATGGCCCAAAGCGATTCATCTCAAATCCATCTCAATTTGCCTACTTCTTCCCAGATTTATTCCTTGCACACACAAAAACACAACAGAGTTAGGGCATGCACATCATCTTCTAACATGTTGTCTTATGATGTGGATTTAGTTCACTGTTTCAGTTTTCGCTTATCATGTTTCTGTGAGCATATATCCACCATAAGTGTTAGGGTGCGTGAGAAGCATGCTAACAGTCACGCTCTCTCACACCAACACGTTCTTTGGGACAACTATAAATACGGAAGAGAAGGCAAAAACGTGGACTCAACGGTCCCTTCTCTCTCTTCAAATTTCTCATTCTCAAACAAAAACAAGAAAAAAAAAACACTCTCTTCTCTCTCTAGATTTTTTTCTCTCTCTCTGCAATGTAGGTCGTCGGAGATGGCAAACTTCCACCGTAACAACGTCGAGCATGTGGTCCTTGGCCACCACCGTTCCAAGAGCACTTCCGTCGCCGGTGGCCACTTCCGCCTATGGCACTCCCTCTCCACCGCCTCCTTCCGCCGCCTCATCTTTGATGCTGTTAGCTGCGGCGCCAGCTCCCGCTATGCCGTGAGATCCGACACGTCCTCCGAGAGACACCACCACCAACCGAAACAACAGCACCAACACAAGACGAAGCCGAATAACGCGAAGTCGGAGAAGCTCTCGGATCTGCTGAACCTCGCGGAGGTCGAGGCTGACGCGGAAACGAAGAAGAAAGAGGACAAGCTCGAGGAGCTGAAGAGCCTAGTGAAGGAGCTTCAGAAGGAAGACGAGGAAGAGAAAGAAGAAGAATCAATGACGCGGAGACGAGAAGCTGCTTCGAAAATGAGGTTGCTAGCGAAAGAGGATGTGGAAGTTAGAGGAACGCTGGCTATGCTTGGAGCCATTCCAACTCTTGTAGCAATGCTCGATGAATGCAAAAACGACGTCGATTCGCTCGTGGCTTCTCTCTACGCGCTGCTCAACCTCGGAATCGGAAACGACGCGAATAAATCAGCTATTGTGAAAGTTGGGTCAGTTGAAAAGATGCTGAACCTGATTGAATCTCCGGATGGTCTAGATTCTTCGGTTTCTGAAGCAATTGTAGCTAATTTCCTTGGACTTAGTGCTTTGGATTCAAATAAGCCCATAATTGGGTCTTCGGCTTCAATTTCTTTCTTAGTTAAAACCCTTCAGAGTTTAGATGACAAGAGAAGTCCACATGCCAAGCAAGATGCTCTACGGGCACTGTACAATCTTTCGATCTACCCAGCCAATGTTGCATTCGTTTTGGAAACAGATTTGGTTGTGTTTCTGGTGAACTCAATAGGGGACATGGAGGTAACTGAAAGAGCTCTTGCAATTCTCAGCAACTTGGTCTCGACCCGAGATGGTAGAAAGGCGATTGGTGCAGTGCAAGATTCGATTCCAATCCTGGTGGATGTGTTGAATTGGACAGATTCGCCAGAATGCCAGGAGAAGGCGTCGTACATTTTGATGGTTATGGCACACAAGTCCTATAGGGACAAACAGGCCATGATTGAGGCAGGGATTGCGTCATCACTACTTGAGTTGTCCCTTTTGGGTACCACATTAGCTCAGAAAAGGGCATCAAGGATACTGGAAATTTTGAGGGTGGACAAAGGGAAACAAATTTCTGGGAGCTATGGCTTGGGTGCTGCTGTCTCTGCCCCTATTTGCGGCTCTTCATCTGTGAAGCCGGATGACGGAGGGAGGGAGTGTTTTGACGAGGAGGAAGATATGATGAGTGAGGAGAAGAAAGCAGTGAAGCAATTAGTCCAGCAGAGTTTGCAGAACAACATGAGGAAAATTGTAAAAAGGGCCAATTTGCCTCACGATATTGTTCCATCTGATCATTTTAAGTCACTCACCTCAAGTTCTACTTCAAAGAGCCTACCATTTTGA 1920 0.4688 MAQSDSSQIHLNLPTSSQIYSLHTQKHNRVRACTSSSNMLSYDVDLVHCFSFRLSCFCEHISTISVRVREKHANSHALSHQHVLWDNYKYGREGKNVDSTVPSLSSNFSFSNKNKKKKTLSSLSRFFSLSLQCRSSEMANFHRNNVEHVVLGHHRSKSTSVAGGHFRLWHSLSTASFRRLIFDAVSCGASSRYAVRSDTSSERHHHQPKQQHQHKTKPNNAKSEKLSDLLNLAEVEADAETKKKEDKLEELKSLVKELQKEDEEEKEEESMTRRREAASKMRLLAKEDVEVRGTLAMLGAIPTLVAMLDECKNDVDSLVASLYALLNLGIGNDANKSAIVKVGSVEKMLNLIESPDGLDSSVSEAIVANFLGLSALDSNKPIIGSSASISFLVKTLQSLDDKRSPHAKQDALRALYNLSIYPANVAFVLETDLVVFLVNSIGDMEVTERALAILSNLVSTRDGRKAIGAVQDSIPILVDVLNWTDSPECQEKASYILMVMAHKSYRDKQAMIEAGIASSLLELSLLGTTLAQKRASRILEILRVDKGKQISGSYGLGAAVSAPICGSSSVKPDDGGRECFDEEEDMMSEEKKAVKQLVQQSLQNNMRKIVKRANLPHDIVPSDHFKSLTSSSTSKSLPF 639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00533 639 Gene3D - 222 400 IPR011989 -
Phco2g00533 639 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 159 639 - -
Phco2g00533 639 Gene3D - 401 552 IPR011989 -
Phco2g00533 639 SMART arm_5 288 330 IPR000225 GO:0005515
Phco2g00533 639 SMART arm_5 332 375 IPR000225 GO:0005515
Phco2g00533 639 SMART arm_5 421 459 IPR000225 GO:0005515
Phco2g00533 639 SMART arm_5 463 502 IPR000225 GO:0005515
Phco2g00533 639 SMART arm_5 376 420 IPR000225 GO:0005515
Phco2g00533 639 Coils Coil 580 600 - -
Phco2g00533 639 MobiDBLite consensus disorder prediction 258 277 - -
Phco2g00533 639 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 299 343 IPR000225 GO:0005515
Phco2g00533 639 MobiDBLite consensus disorder prediction 196 224 - -
Phco2g00533 639 Coils Coil 230 275 - -
Phco2g00533 639 SUPERFAMILY ARM repeat 250 542 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00533 Phco-Chr2 5027832 5034291 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00533 2 5027832 5034291 Phco7g00700 7 5369710 5371295 PCT