Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00686 ATGATGCTTCGGTTCCTTGTGTCGCTTCTCGTGTTGGCAAGTTGTAAGGAGAGTTACAAAATAGCGAAAGCAGAGCACACAGTAGCTTCAGCAAGAGCGTCTTTGGTTAGACAAGAAGACACCATAATTTTTGCTTTGATTGAGAGAGCCAGATTTCCTTTGAATTCCCCAACCTACAATCAGAGTTACACATTCATTTCCCATCTTCAAGATTCAATTCTTGACTTCGTCATTCGCAACACAGAGGCCGTTCAATCCAAGGCCGGTAGATACATTAATCCTGAAGAAAATCCTTTCTTCCCAAAAAATTTACCACCCTCGGTTGTGCCACATTACCCCTTCTCACATTTTTTGCATCCTGCAGCTGCTTTGATCAACATAAACCAGGACATTTGGAAACTGTACTTTAATGAGCTGCTTCCAATGTTTGTTGCTTCCGGTGATGATGGCAACTATGCACAAACTGCTGCTGCCGATCTTACGTTGTTGCAGGCCATCTCTAGAAGGATTCATTATGGAAAATTTGTAGCTGAGGCCAAATTTAGAGAAGCTCCTCAAGTCATTGAGCCTTTAATTCGTGCCAAGGACAGGGAAGCATTGATGAAATTGTTGACACTTAAGAGGGTTGAAGAGATGGTGGTGAAGAGGGTTGAGAAGAAGGCCATGGTGTTTGGGCAGGAAGTGAGCCTTGACAATGATGTCAAAAAGGGAGGAACATACAAGGTTGATCCATCAATTGTTTCTCTGTTGTACCAGAAATGGTTAATACCCCTCACAAAAAATGTTGAACTCGAATACTTACTGAAACGCCTCGATTGA 819 0.4249 MMLRFLVSLLVLASCKESYKIAKAEHTVASARASLVRQEDTIIFALIERARFPLNSPTYNQSYTFISHLQDSILDFVIRNTEAVQSKAGRYINPEENPFFPKNLPPSVVPHYPFSHFLHPAAALININQDIWKLYFNELLPMFVASGDDGNYAQTAAADLTLLQAISRRIHYGKFVAEAKFREAPQVIEPLIRAKDREALMKLLTLKRVEEMVVKRVEKKAMVFGQEVSLDNDVKKGGTYKVDPSIVSLLYQKWLIPLTKNVELEYLLKRLD 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00686 272 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 15 - -
Phco7g00686 272 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 22 272 IPR037039 GO:0004106|GO:0009073
Phco7g00686 272 NCBIfam chorismate mutase 29 272 IPR008238 GO:0004106|GO:0009073
Phco7g00686 272 PANTHER CHORISMATE MUTASE 14 272 IPR008238 GO:0004106|GO:0009073
Phco7g00686 272 FunFam Chorismate mutase 20 272 - -
Phco7g00686 272 PIRSF Chor_mut_AroQ_eu 17 272 IPR008238 GO:0004106|GO:0009073
Phco7g00686 272 ProSiteProfiles Chorismate mutase domain profile. 19 272 IPR008238 GO:0004106|GO:0009073
Phco7g00686 272 SUPERFAMILY Chorismate mutase II 27 272 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00686 Phco-Chr7 5213948 5215723 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00686 7 5213948 5215723 Phco7g00686 7 5213948 5215723 ECH
Phco2g00486 2 4384410 4387038 Phco7g00686 7 5213948 5215723 PCT