Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00486 ATGATGCATCGGTTTCCATTGGTGATTCTTGTGTTGACAATATGTGCCGTGAGATGCAGAATGGCCAAAGCAGAAGAAACTGTGTACACGCTGACTTCGGTGAGGGAGAATTTGATTAGGCAAGAGGATACCATCATTTACGGTCTCATTGAGAGAGCCAAGTTTCCTTCCAATTCTCACACCTATGATGAGAAGTATGCTCAAATCCCTGGCTTTTCTGGCTCATTGGTGGAATTTGTTGTTAAAAATACAGAGGACATTCAAGCTAAGGCTGGAAGATACACAAACCCTGAAGAAAACCCCTTCTTCCCTGAAAATTTACCACCATCAAGTGTGCCATCTTACCCCTTCTCACAGTTTTTGCATCCTGGAGCTGCTTCAATTAACATAAACAAGTCCATCTGGAAAATGTATTTGAAAGATTTACTTCCATTGCTTGCTACTCCGGGTGATGATGGCAACTATGCGCAAACTGCTGCTACTGATCTTTCATTAATGCAGGCTATCTCAAGAAGGATTCATTATGGAAAGTTTGTAGCTGAGGTGAAATTCAGGGATGCTCCAAAAGACTATGAGCCTTTAATTCGAGCCAAGGATAGGGAAGGTTTGATGAAATTGTTGACATTTGCTAGCGTTGAAGAGACAGTGAGGAAGAGGGTTGAAAAGAAGGCCACAGTGTTTGGTCAGGAAGTAAGTCTTGACAGTGATAATGATGGCAATCAAAAGAGTAAGTTAACTCCATCAGTGGCTTCTAGTTTGTACAAAAATGGGGTGATACCTCTTACCAAGGAGGTTCAGGTTGAGTACCTCTTGCGCCGTCTAGACTGA 828 0.4239 MMHRFPLVILVLTICAVRCRMAKAEETVYTLTSVRENLIRQEDTIIYGLIERAKFPSNSHTYDEKYAQIPGFSGSLVEFVVKNTEDIQAKAGRYTNPEENPFFPENLPPSSVPSYPFSQFLHPGAASININKSIWKMYLKDLLPLLATPGDDGNYAQTAATDLSLMQAISRRIHYGKFVAEVKFRDAPKDYEPLIRAKDREGLMKLLTFASVEETVRKRVEKKATVFGQEVSLDSDNDGNQKSKLTPSVASSLYKNGVIPLTKEVQVEYLLRRLD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00486 275 ProSiteProfiles Chorismate mutase domain profile. 22 275 IPR008238 GO:0004106|GO:0009073
Phco2g00486 275 SUPERFAMILY Chorismate mutase II 25 275 IPR036263 GO:0046417
Phco2g00486 275 FunFam Chorismate mutase 22 275 - -
Phco2g00486 275 PIRSF Chor_mut_AroQ_eu 18 275 IPR008238 GO:0004106|GO:0009073
Phco2g00486 275 PANTHER CHORISMATE MUTASE 23 275 IPR008238 GO:0004106|GO:0009073
Phco2g00486 275 NCBIfam chorismate mutase 30 275 IPR008238 GO:0004106|GO:0009073
Phco2g00486 275 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 23 275 IPR037039 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00486 Phco-Chr2 4384410 4387038 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00486 2 4384410 4387038 Phco2g00486 2 4384410 4387038 ECH
Phco2g00486 2 4384410 4387038 Phco7g00686 7 5213948 5215723 PCT