Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00682 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGCTCTTCAAGCTGATGGAAATTGTATCAGGTATATGTCATCTGAATTGGCTACAGATGTTACTGTTAATGTTGGTGATGTTACGTTTCACCTTCACAAGTTCCCTCTACTGTCAAAGAGCAACCGACTACAGAAACTGGTATCAAAAGCTAATGAAGAGAACTCTGATGACATTTACTTGGATGATTTTCCTGGAGGACCAAAGGCTTTTGAAATATGTGCAAAATTCTGTTATGGGATGACAGTTACTCTTAATGCTTACAATGTTGTAGCTGCTCGTTGTGCAGCTGAGTATCTTGAGATGACTGAGGATGTTGATAGAGGAAACTTGGTTTTAAAGATTGAGGTGTTTCTTAACTCAAGTATCTTCCGTTGCTGGAAGGATTCTATTATTGTTCTCCAAACTTCTAAATCTCTTCTGCCATGGTCTGAGGATCTGAAGATCATTGGGAGATGCACAGACTCCATAGCTTCTAAAACTAGTGTGGACCCAGCGTACATCACTTGGTCTTACACTTATAATAGGAAATTATCTGAACCTGATAAAATTGTTGAGGACAAGATGACATTTTTAGAGAAAATTGAGTCTGTTCCTAAGGATTGGTGGGTTGAAGACATATGTGAGCTGGACATTGATCTTTACAAACGAGTAATGGTTGCTGTGAAATCTATGGGAAGAATGGATGGTGCCGTTATTGGGGAGGCACTAAAAACCTATGCCTTTAGATGGATACCTGATTCTGTCGATACATTGGTTTATGGTGTCAATGCCTCGAGGACTAAATCTGTGGTAGAAACAATTGTCTGTTTATTGCCATATGATAATGGCATTGGTTGTTCGTGTAGTTTCTTACTGAAGCTATTGAGAGTGGCCATATTAGTCTGTGCAAATGAGTCATCAAAAAAGGAATTGATGAAGAGCATTAGCTTCAAATTGCATGAAGCTTGTGTCAAAGATTTATTGATTCCCGCAAGATCTCCCCAGACTACTACATATGATGTTCATTTGGTACAAGGTCTTTTGAATCAATATATGAATGACGAAAAGGGAAGAAGTAGTATGGATGTTGTTGAGGATAAACATGGAGAAGATGAATATATTTTAGCACGAAGGTCTTTATTGAATGTTGGCAAGTTGGTGGATGGTTATCTTGGAGAAATTGCACATGATCCTAATCTTGGCCTCTCTAGTTTTGCTGATTTGTCACAATCCATTCCAGGTTTTGCTAGACCAGATCATGATGGTCTATACAGAGCTATAGACATCTACTTGAAGGAGCATCCAGAATTGACTAAAGCCGAAAGGAAGAAACTATGTGGGCTGATGGATGTCCGGAAATTGACAGCGGATGCTTCCATGCATGCTGCACAGAATGAATGCCTTCCCCTTCGGGTTGTAGTCCAAGTTCTCTTCTTTGATCAGGTAAGGTCTTCTATCAGCTTTCAACCACTCAGCCACAACAGCATGTATGACCCTTCACGCTCTCCAATGAATCGAGATGAGGGGTGTAAGAAAACAGTGGGAGATAACTGCCAACCCCTCAAGAACCAGATGAGCCATTTGAGGGTCAAGGATGAAGAGTTGCATAAAAATGGGAAACTAGGTAAGAAGAATAGCAAAAACAGCAAAAGTGGCCTTCAGTTGCTGCCATCAAGATCTAGGAGAATTTTTGACAAGTTATGGAGTCTGAGAAAAGTACAAGGAGAGAATAGGAGCTCGGAGACTTCAGGAAGTTCTAGTAGCCCAACTTCTTTAGGCCATGGTGATACCAAATCATATGGTCTATCTCTGAGACACCAGAGGCATTCCATCTCTTAG 1851 0.4046 MKFMKLGSKPDALQADGNCIRYMSSELATDVTVNVGDVTFHLHKFPLLSKSNRLQKLVSKANEENSDDIYLDDFPGGPKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDVDRGNLVLKIEVFLNSSIFRCWKDSIIVLQTSKSLLPWSEDLKIIGRCTDSIASKTSVDPAYITWSYTYNRKLSEPDKIVEDKMTFLEKIESVPKDWWVEDICELDIDLYKRVMVAVKSMGRMDGAVIGEALKTYAFRWIPDSVDTLVYGVNASRTKSVVETIVCLLPYDNGIGCSCSFLLKLLRVAILVCANESSKKELMKSISFKLHEACVKDLLIPARSPQTTTYDVHLVQGLLNQYMNDEKGRSSMDVVEDKHGEDEYILARRSLLNVGKLVDGYLGEIAHDPNLGLSSFADLSQSIPGFARPDHDGLYRAIDIYLKEHPELTKAERKKLCGLMDVRKLTADASMHAAQNECLPLRVVVQVLFFDQVRSSISFQPLSHNSMYDPSRSPMNRDEGCKKTVGDNCQPLKNQMSHLRVKDEELHKNGKLGKKNSKNSKSGLQLLPSRSRRIFDKLWSLRKVQGENRSSETSGSSSSPTSLGHGDTKSYGLSLRHQRHSIS 616
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00682 616 Pfam NPH3 family 211 463 IPR027356 -
Phco7g00682 616 SUPERFAMILY POZ domain 22 116 IPR011333 -
Phco7g00682 616 MobiDBLite consensus disorder prediction 578 601 - -
Phco7g00682 616 PANTHER OS12G0117600 PROTEIN 24 571 IPR043454 -
Phco7g00682 616 MobiDBLite consensus disorder prediction 495 536 - -
Phco7g00682 616 MobiDBLite consensus disorder prediction 578 616 - -
Phco7g00682 616 Pfam BTB/POZ domain 22 115 IPR000210 GO:0005515
Phco7g00682 616 CDD BTB_POZ_NPY3-like 21 124 - -
Phco7g00682 616 Gene3D Potassium Channel Kv1.1; Chain A 9 125 IPR011333 -
Phco7g00682 616 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
Phco7g00682 616 SMART BTB_4 29 127 IPR000210 GO:0005515
Phco7g00682 616 MobiDBLite consensus disorder prediction 541 560 - -
Phco7g00682 616 ProSiteProfiles NPH3 domain profile. 211 487 IPR027356 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00682 Phco-Chr7 5192636 5196643 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00484 2 4364754 4368743 Phco7g00682 7 5192636 5196643 PCT