Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00484 ATGAAGTTTATGAAGTTGGGTTCCAAGCCTGATGTTCTTCAAGCTGACGGAAAATCTATCAGGTATATATCATCTGAATTGGCTACAGATATTATCATAACTGTTGGTGAAGTGAAGTTTCACCTGCACAAGTTCCCTCTATTGTCCAAGAGTAATCGTTTACAAAAGTTGCTGGCAAGGGCTAATGAAGAGTATTCTGATGAAGTTCAATTGGATGATTTTCCTGGTGGTTCCAAGGCCTTTGAAATATGTGCAAAGTTCTGCTACGGAATGACTGTTACTCTTAATGCTTACAATGTTGTGGCTGCTCGTTGTGCAGCTGAGTACCTTGAAATGACTGAGGATATTGAGAAAGGGAACTTAGTTTTTAAAATTGAGGTGTTTCTTACCTCCAGTATATTTCGTAGCTGGAAGGATTCTATAATTGTTCTCCAAACTACTAAATCTCTTCTGCCATGGTCTGAGGACCTGAAGATAGTTGGGAGATGCATAGATTCCATAGCATCTAAAACTTCTGTGGACCCAGCAAACATCACTTGGTCTTATACTTATAACCGGAAATTATCAGAACTTGATAAAATTGTTGAGGACAAGACAGCACCACAAGACAAAATTGAGCCTGTTCCCAAGGATTGGTGGGTTGAAGATATATGTGAGCTGGACATTGATCTATATAAACGGGTTATGATTACAGTCAAATCGAAGGGAAGAATGGATGGAGTTGTGATTGGTGAGGCACTAAAAATGTATGCTGTAAGATGGTTGCCTGATTCTGTTGATGCATTGGTTTCCGATGCCCATGCCCGGAGGAACAAATCTCTTGTAGAAACAATTGTCTGTTTGTTGCCATGTGATAATGGCATGGGTTGTTCATGTAGTTTCTTGCTGAAGCTATTGAAAGTGGCCATATTAGTAGAAGCTGACGAGTCTTCAAGGGGACAATTGATGAAGAACATTGGCCTAAAATTGCATGAAGCTTCTGTCAAAGATTTACTGTTTCCAGCAAGGCTTCCTCAGATCACCAAACTTGATTTTGATCTGGTGCAAAACCTTTTGAACCTATACATGACGAATGTAAGGGGAAGCCGCGATATGGAGATCGAAGACAAGAAAGATAAAGCAAACGAGTATGAGTCTATTTTAGGCCAGAGGTCTTTATTGAATGTTGGCAAGTTGGTAGATGGCTATCTTGGAGAAATTGCTCATGATCCAAATCTCAGCCTCTCTAATTTTGTTGGTTTGTCACAGTCAATTCCAGACTTTGCTAGACCAAATCATGATGGTCTGTACAGAGCTATAGACATCTACTTGAAGGAGCACCCAGGTTTGACAAAAGCTGAAAGGAAGAAGATATGTGGACTAATGGATGTCAAGAAATTGACAGTGGATGCATCCATGCATGCTGCTCAGAATGAACGCCTTCCCCTTAGAGTAGTTGTGCAGGTTCTCTATTTCGAGCAGATCAGAGCTGCTGCCAACGGCCGGACGCATGGTAACAGTCCACGTGACTCCTCAAGCACTCCTGTGAATGACAATGAGGAGTGTGTGAAAACTGGGGGAGAGAGCTGCCATTCCCTCAACACCCAGATGTGTCACTTGAAGATCAGAGACGAGGAGTTTCACAAGAATGGGAAACTGAACAAGAAGAGTAGCAAAAACAGCAGAAGTGGCATGCAGTTGCTGCCATCTAGGTCAAGGAGAATCTTTGATAAGTTGTGGATTGTTGGAAAAGGGCAAGGAGAAAATAGGAGTTCAGAGACTTCAGGGAGTTCTAATAGTCCAACTTCTGTTGTCCCTGGAGACACCAAATCATCTGGTTCATCATTGAGACACAGGAGGCATTCTATCTCTTAG 1854 0.4191 MKFMKLGSKPDVLQADGKSIRYISSELATDIIITVGEVKFHLHKFPLLSKSNRLQKLLARANEEYSDEVQLDDFPGGSKAFEICAKFCYGMTVTLNAYNVVAARCAAEYLEMTEDIEKGNLVFKIEVFLTSSIFRSWKDSIIVLQTTKSLLPWSEDLKIVGRCIDSIASKTSVDPANITWSYTYNRKLSELDKIVEDKTAPQDKIEPVPKDWWVEDICELDIDLYKRVMITVKSKGRMDGVVIGEALKMYAVRWLPDSVDALVSDAHARRNKSLVETIVCLLPCDNGMGCSCSFLLKLLKVAILVEADESSRGQLMKNIGLKLHEASVKDLLFPARLPQITKLDFDLVQNLLNLYMTNVRGSRDMEIEDKKDKANEYESILGQRSLLNVGKLVDGYLGEIAHDPNLSLSNFVGLSQSIPDFARPNHDGLYRAIDIYLKEHPGLTKAERKKICGLMDVKKLTVDASMHAAQNERLPLRVVVQVLYFEQIRAAANGRTHGNSPRDSSSTPVNDNEECVKTGGESCHSLNTQMCHLKIRDEEFHKNGKLNKKSSKNSRSGMQLLPSRSRRIFDKLWIVGKGQGENRSSETSGSSNSPTSVVPGDTKSSGSSLRHRRHSIS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00484 617 Gene3D Potassium Channel Kv1.1; Chain A 13 121 IPR011333 -
Phco2g00484 617 ProSiteProfiles NPH3 domain profile. 211 489 IPR027356 -
Phco2g00484 617 Pfam NPH3 family 211 465 IPR027356 -
Phco2g00484 617 PANTHER OS12G0117600 PROTEIN 25 565 IPR043454 -
Phco2g00484 617 Pfam BTB/POZ domain 26 116 IPR000210 GO:0005515
Phco2g00484 617 MobiDBLite consensus disorder prediction 494 513 - -
Phco2g00484 617 CDD BTB_POZ_NPY3-like 21 124 - -
Phco2g00484 617 MobiDBLite consensus disorder prediction 542 561 - -
Phco2g00484 617 SUPERFAMILY POZ domain 23 114 IPR011333 -
Phco2g00484 617 MobiDBLite consensus disorder prediction 580 605 - -
Phco2g00484 617 MobiDBLite consensus disorder prediction 494 521 - -
Phco2g00484 617 MobiDBLite consensus disorder prediction 578 617 - -
Phco2g00484 617 ProSiteProfiles BTB domain profile. 29 97 IPR000210 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00484 Phco-Chr2 4364754 4368743 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00484 2 4364754 4368743 Phco2g00484 2 4364754 4368743 ECH
Phco2g00484 2 4364754 4368743 Phco7g00682 7 5192636 5196643 PCT