Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00576 ATGAAGCCGAAACGGGGCCACGTAGCTTGGAAGGGAGTTTCGTCAACGATAGAGTCCTCAAAGAAACCTGGGTGCATTCATTCGGTCACAGCAACACACAGACAAAACATCACTATGGCTCTTCTCAGTCGAGCCTCCTTACGCTTCCATCAACTGCACTCCCATCAACGGGCACTCTCCCTCCACACAACGCTCCCAACTCTCAACGCATCCACATCCACACCCACGCCCACGCCATATGCTCCGCCACCGCCTCCGTCCGCTTCCTCTCCCGTCGGCGTCTCCAAGACGGCGGAGTTCGTCATCTCCAAGGTCGACGATCTCATGAACTGGGCCCGCCGCGGCTCCATCTGGCCCATGACCTTCGGCCTTGCCTGCTGCGCCGTCGAAATGATGCACACCGGCGCCGCCCGCTATGATCTCGATCGCTTCGGCATCATTTTCAGGCCCAGCCCTCGCCAGTCCGACTGCATGATCGTCGCAGGCACTCTCACAAACAAGATGGCTCCCGCTCTTCGCAAGGTTTATGACCAAATGCCTGAACCTAGATGGGTCATTTCAATGGGAAGTTGTGCTAACGGCGGAGGATACTACCACTACTCTTACTCAGTGGTTCGAGGATGTGACAGGATTGTTCCCGTTGACATATATGTTCCAGGCTGTCCTCCAACTGCTGAGGCTTTGTTGTATGGACTCCTCCAGCTGCAGAAAAAGATCAATAGGCGCAAAGACTTCCTCCATTGGTGGACAAAGTGA 756 0.5529 MKPKRGHVAWKGVSSTIESSKKPGCIHSVTATHRQNITMALLSRASLRFHQLHSHQRALSLHTTLPTLNASTSTPTPTPYAPPPPPSASSPVGVSKTAEFVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGLLQLQKKINRRKDFLHWWTK 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00576 251 Gene3D - 97 251 - -
Phco7g00576 251 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 92 240 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco7g00576 251 MobiDBLite consensus disorder prediction 67 92 - -
Phco7g00576 251 PANTHER NADH DEHYDROGENASE 95 250 - -
Phco7g00576 251 NCBIfam NADH-quinone oxidoreductase subunit B 100 241 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco7g00576 251 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 126 235 IPR006137 GO:0051536
Phco7g00576 251 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 207 223 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco7g00576 251 SUPERFAMILY HydA/Nqo6-like 99 243 - -
Phco7g00576 251 MobiDBLite consensus disorder prediction 76 90 - -
Phco7g00576 251 FunFam NADH-quinone oxidoreductase subunit B 2 92 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00576 Phco-Chr7 4319990 4323809 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00576 7 4319990 4323809 Phco7g00576 7 4319990 4323809 ECH
Phco2g00399 2 3433637 3434837 Phco7g00576 7 4319990 4323809 PCT