Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco2g00399 ATGTTGTGTCGTGCTCGTGTCTCCATGGCTCTCATCCCTCGAACCGGAACCACGTGGCGCCTCCCTCAGCGGCTAACTTCAGCGTCGCTCCTCCACAGCAGCTCCTCCGATGCGGTGGCTCCGACGAGTTATTGTGCGTCGCCACCGACGGCAAAGTCCTCCCCCGTGGGGTTATCGAAGCCGGCGGAGTTCGTGATCTCCAAGGTGGACAACCTCATGAACTGGGCCCGCGTGGGATCCATCTGGCCCATGACGTTTGGGCTAGCCTGCTGCGCCGTGGAGATGATGCACACGGGTGCGGCCCGTTACGATCTGGACCGCTTCGGAATCATCTTCAGGCCCAGCCCACGCCAGTCCGATTGCATGATCGTTGCTGGCACCCTCACCAACAAGATGGCCCCCGCCCTTCGCAAGGTTTATGATCAAATGCCAGAACCAAGGTGGGTGATATCAATGGGAAGCTGTGCTAATGGAGGTGGATATTATCACTATTCATACTCAGTTGTTAGAGGATGTGACAGGATTGTTCCTGTTGACATTTATCTTCCTGGTTGTCCTCCAACTGCTGAAGCTTTACTCTATGGCCTCCTTCAGCTCCAGAAGAAGATCAACAGGCGCAAGGACTTCCTCTGGTGGTGGACAAAGTGA 648 0.5602 MLCRARVSMALIPRTGTTWRLPQRLTSASLLHSSSSDAVAPTSYCASPPTAKSSPVGLSKPAEFVISKVDNLMNWARVGSIWPMTFGLACCAVEMMHTGAARYDLDRFGIIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYLPGCPPTAEALLYGLLQLQKKINRRKDFLWWWTK 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco2g00399 215 Hamap NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 56 204 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco2g00399 215 ProSitePatterns Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 171 187 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco2g00399 215 Gene3D - 53 211 - -
Phco2g00399 215 FunFam NADH-quinone oxidoreductase subunit B 2 57 215 - -
Phco2g00399 215 Pfam NADH ubiquinone oxidoreductase, 20 Kd subunit 90 199 IPR006137 GO:0051536
Phco2g00399 215 NCBIfam NADH-quinone oxidoreductase subunit B 64 205 IPR006138 GO:0008137|GO:0048038|GO:0051539
Phco2g00399 215 PANTHER NADH DEHYDROGENASE 59 214 - -
Phco2g00399 215 SUPERFAMILY HydA/Nqo6-like 63 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco2g00399 Phco-Chr2 3433637 3434837 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco2g00399 2 3433637 3434837 Phco2g00399 2 3433637 3434837 ECH
Phco2g00399 2 3433637 3434837 Phco7g00576 7 4319990 4323809 PCT