Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco7g00486 ATGGCCAATCACCACCGCTATCATCATGCACATGACACCAACCTTAAATCCCTTCTCGACACCCTATACTGCTCCGAAGAGCATTGGGAGGAACACGTTGGGGAAGATGAATTAGACCAAACAGAGGATGATTACCTAAGCGCTAATAATACTACTAATAATTACACCACCAGTGGCAGCACCATAATAAACTCCCTTCACTCCCCTCATGTGTTGTTGGAAAGCGACATGTTTTGTGACGAACAAGAGTTGGCATCGCTGCTGGGGAAAGAACAACACAACCCTCTAAGCACTTGCCTCCAAACCAACCCTGCGTTGGAGTGTGCTCACAGAGAAGGCGTAGAGTGGATGCTCAGAGTGAACGCTCACTACTCCTTCTCTGCTCTCACAGCTCTTCTTGCCGTCAACTACTTTGACCGATTCCTCTCCACCCTCCACTTTCAGGATGGCAAGCGATGGATGACTCATCTGGCTGCCGTCGCTTGCCTCTCTCTCGCTGCCAAAGTGGAGGAGACACAAGTTCCCCTTCTCCTAGACCTTCAAGTGGAGGAGGGTAGATACTTGTTCGAAGCCAAAACGATTAAAAGGATGGAGATTTTGGTCCTTTCCACTCTTGGATGGAAGATGAACCCGCCAACCCCTCTCTCCTTTCTTGATTACATCACAAGAAGACTTGGATTGAAGGGTCATCTCTGCTGGGAGTTTCTCAGGAAGTGCGAAGGCCTTCTTGTCTCCGTCCTCGGAGATTGGAGGTTAATGGGTTATCTACCGTCTGAATTGGCAAGTGCTACGATGATGCACGTTGTGAAAAGCGTGAAGCCTTGTCTAGAAGGTGAATACCAGAGGCAACTCTTGGGTATTCTGGGATTCGACCAGGAGAAGGTGAACGAGTGTAGGAAGGTGTTGGAATTGTGGTCAGGGTACGGGAAGCAGGGAAAGCAATGCACGAAACGGAAGTTTGTAAGCGTTCCAGGAAGTCCAAACGGCGTGATGGAGATGTCGTTTAGCTGTGATAGCTCGAATGAGTCGTGGGCAGTAGCTGCAGCAGCTGCTGCTGCTGCTGCTTCAGTGTCTTCTTCACCGGAACCTTTGTCGAAGAAGAGTAGAAGTGAAGTAAAGCGATAA 1125 0.4924 MANHHRYHHAHDTNLKSLLDTLYCSEEHWEEHVGEDELDQTEDDYLSANNTTNNYTTSGSTIINSLHSPHVLLESDMFCDEQELASLLGKEQHNPLSTCLQTNPALECAHREGVEWMLRVNAHYSFSALTALLAVNYFDRFLSTLHFQDGKRWMTHLAAVACLSLAAKVEETQVPLLLDLQVEEGRYLFEAKTIKRMEILVLSTLGWKMNPPTPLSFLDYITRRLGLKGHLCWEFLRKCEGLLVSVLGDWRLMGYLPSELASATMMHVVKSVKPCLEGEYQRQLLGILGFDQEKVNECRKVLELWSGYGKQGKQCTKRKFVSVPGSPNGVMEMSFSCDSSNESWAVAAAAAAAAASVSSSPEPLSKKSRSEVKR 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco7g00486 374 Gene3D - 211 300 - -
Phco7g00486 374 MobiDBLite consensus disorder prediction 355 374 - -
Phco7g00486 374 Pfam Cyclin, N-terminal domain 93 210 IPR006671 -
Phco7g00486 374 SMART Cyclin_C_2 212 339 IPR004367 -
Phco7g00486 374 FunFam D6-type cyclin 93 210 - -
Phco7g00486 374 CDD CYCLIN_AtCycD-like_rpt2 213 302 - -
Phco7g00486 374 CDD CYCLIN_AtCycD-like_rpt1 111 207 - -
Phco7g00486 374 SMART cyclin_7 115 203 IPR013763 -
Phco7g00486 374 SUPERFAMILY Cyclin-like 195 303 IPR036915 -
Phco7g00486 374 FunFam CYCLIN D32 211 300 - -
Phco7g00486 374 Gene3D - 108 210 - -
Phco7g00486 374 Pfam Cyclin, C-terminal domain 212 320 IPR004367 -
Phco7g00486 374 SUPERFAMILY Cyclin-like 82 210 IPR036915 -
Phco7g00486 374 PANTHER CYCLINS 87 303 IPR039361 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco7g00486 Phco-Chr7 3549156 3550764 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco7g00486 7 3549156 3550764 Phco4g01149 4 9456315 9457620 ECH
Phco7g00486 7 3549156 3550764 Phco8g01014 8 10578986 10580446 ECH
Phco7g00486 7 3549156 3550764 Phco6g02826 6 49494196 49495884 ECH
Phco7g00486 7 3549156 3550764 Phco7g00486 7 3549156 3550764 ECH
Phco2g00298 2 2409610 2411136 Phco7g00486 7 3549156 3550764 PCT