Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Phco6g02828 ATGGATTCAGTGCCTGCTGATGTGTCTGATTCACATCTTATCAAAGATCCACCCACTTCTTCTCCTGCTAAAGAGAGTGATGCTGCTTTAGTTTCTGAGCAAGATAATTCAGCACGTGAGACACCTTCTGTGCTGTCCCCACCTGGCATATCGTCTTGGGCCAAAAGCTTGAAAATTTCTCAGTCATTTTCTGGCTCCCAAGATGACTCATCGAGTGGAAATGTTGGGAAATCAACTTTTGCTCGCTTCACTAGTAATCTGGGATTGAGGATGTCTCCAAAGTCTCCTGTAGCAGATGACAGTTCCAATGAAACTGCTGTACAATCTAATTTGTTTGGAAGCATTACGAAAGGGCTGGTTGACACTTCTAAGAATGCTGTGAAAGCTGTGCAGGTTAAGGCACGCCATGTTGTTTCCCAGAATAAACGCAGATACCAGGAAGGAGGTTTTGATTTAGATATGACATATATCACTGAAAACATCATTGCAATGGGATTCCCTGCTGGTGACATGAGCTCTGGGTTTTTCGGCTATGTTGAAGGATTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAAACTCAGCATAAGGATAAATACAAGGTTTATAATCTTTGTTCAGAGCGGTTGTACGATGCATCATTGTTTGAGGGGAAGGTGGCTAGCTTCCCTTTTGATGACCACAATTGCCCACCAATTCAACTGGTTATATCATTCTGTCAAAGTGCTTACTCATGGTTGAAACAAGACATTGAGAATGTCGTGGTTGTCCACTGTAAGGCTGGAATGGCTAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACCGCTGAGGAATCGATGGATTACTATAATCAAAAAAGATGTGTTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGTCTTAACTTACTTCAATGGCGAAAACCCTCCTGCCCGCAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTGTAACCGTCTCAGATCATAGTGGTGTGTTGTTCTCAACCAAAAAGCATCCGAGAACCAAGGAGCTTTTGCCAGAAGATTTTTGGTTTAGTGCACCAAAGAAGGGAGTGATGGTGTTTGCTTTGCCAGGAGAGCCTGGTCTTACAGAGTTGGCTGGGGACTTCAAAATTCATTTTCATGATCGCCAAGGAGATTTTTACTGTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCGGTGATCTAGATGGCTTTGACAAGAGAAAATTACCTTCTCCGGGATTTATGGTTGAGATTGTGCTCGTGGACTATAATGGCAATGTTGTAAGTTCGCAACCTGAAACTACAACAACAAAATCAGATGAGAGTTCAAGTAACAGTCCTGCTGGTCCTGCGCCAGTGGAAAGGAGCACACCTGCACAGAATGCGGCCAAAGAATCAGAGTCTCATAATAATGATAAAGATGATGTGTTTTCAGATGGCGAGGCAGAGCAATCCGCTTCTTCAAGAACCAAGCAAACAAAAGTACCTTCTGAAGCAGTTGAAACAGTTAAAAATGATACCAGAGGGTCCGACTCCAACAGAATTTCAAATCAAATTGCAAATTTATCGCATGCAACAGAACAAGTTTCCTTGGGAAACAAGAACTCCTCCACGTCAATTCATAAGGCTAGTGAGCCAAGAAGTAATGTTGACGGAAAAACAGTGTCCAGTATCGAGGTGCCCAGCGCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCTTCTGTTTTTACCTTTGGAGATGACGAAGACTACGAAAGTGATTGA 1866 0.425 MDSVPADVSDSHLIKDPPTSSPAKESDAALVSEQDNSARETPSVLSPPGISSWAKSLKISQSFSGSQDDSSSGNVGKSTFARFTSNLGLRMSPKSPVADDSSNETAVQSNLFGSITKGLVDTSKNAVKAVQVKARHVVSQNKRRYQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETQHKDKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLVISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCVDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRCMLRGFRLHRCPYWIRPSVTVSDHSGVLFSTKKHPRTKELLPEDFWFSAPKKGVMVFALPGEPGLTELAGDFKIHFHDRQGDFYCWLNTTMTENRKVLNTGDLDGFDKRKLPSPGFMVEIVLVDYNGNVVSSQPETTTTKSDESSSNSPAGPAPVERSTPAQNAAKESESHNNDKDDVFSDGEAEQSASSRTKQTKVPSEAVETVKNDTRGSDSNRISNQIANLSHATEQVSLGNKNSSTSIHKASEPRSNVDGKTVSSIEVPSAESEFKAMAADASVFTFGDDEDYESD 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Phco6g02828 621 ProSitePatterns Tyrosine specific protein phosphatases active site. 259 269 IPR016130 GO:0016311|GO:0016791
Phco6g02828 621 SMART PTEN_C2_2 327 455 IPR014020 -
Phco6g02828 621 MobiDBLite consensus disorder prediction 463 484 - -
Phco6g02828 621 MobiDBLite consensus disorder prediction 25 51 - -
Phco6g02828 621 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 257 296 IPR000387 GO:0016311|GO:0016791
Phco6g02828 621 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 120 590 - -
Phco6g02828 621 MobiDBLite consensus disorder prediction 542 589 - -
Phco6g02828 621 Gene3D Protein tyrosine phosphatase superfamily 128 325 IPR029021 -
Phco6g02828 621 MobiDBLite consensus disorder prediction 499 513 - -
Phco6g02828 621 MobiDBLite consensus disorder prediction 1 51 - -
Phco6g02828 621 ProSiteProfiles C2 tensin-type domain profile. 329 456 IPR014020 -
Phco6g02828 621 MobiDBLite consensus disorder prediction 514 533 - -
Phco6g02828 621 ProSiteProfiles Phosphatase tensin-type domain profile. 143 322 IPR029023 -
Phco6g02828 621 MobiDBLite consensus disorder prediction 463 589 - -
Phco6g02828 621 FunFam Phosphatidylinositol 3,4,5-trisphosphate 3-phosphatase TPTE2 128 325 - -
Phco6g02828 621 CDD PTP_PTEN 153 317 IPR045101 GO:0016791
Phco6g02828 621 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 156 324 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Phco6g02828 Phco-Chr6 49500601 49507470 Dispersed
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Phco6g02828 6 49500601 49507470 Phco6g02828 6 49500601 49507470 ECH
Phco4g01147 4 9433260 9442380 Phco6g02828 6 49500601 49507470 PCT